RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 FAM166AQ6J272 317 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 LRRC69Q6ZNQ3 347 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 ZNF627Q7L945 461 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 GATSQ8NAP1 163 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 TMEM185AQ8NFB2 350 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 OR1J2Q8NGS2 313 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 VRK1Q99986 396 aaPredicted RBP10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 PDCD10Q9BUL8 212 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 SLCO5A1Q9H2Y9 848 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 ELOVL3Q9HB03 270 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 HRASLS2Q9NWW9 162 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 H0Y8X5 98 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 M0QYG6 137 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 SIGLEC5O15389 551 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 APBB3O95704 486 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 CYB5AP00167 134 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 GP1BAP07359 652 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 SIGLEC14Q08ET2 396 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 CCINQ13939 588 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 ATPAF1Q5TC12 328 aaPredicted RBP10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 C11orf87Q6NUJ2 197 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 SPRED2Q7Z698 418 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 TAF8Q7Z7C8 310 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 GALNT16Q8N428 558 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 OTOSQ8NHW6 89 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 DGAT2Q96PD7 388 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 OR8B4Q96RC9 309 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 LMF1Q96S06 567 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 AMELYQ99218 206 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 ZNF471Q9BX82 626 aaPredicted RBP10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 TINAGL1Q9GZM7 467 aaPredicted RBP10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 WDR13Q9H1Z4 485 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 PIGMQ9H3S5 423 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 GDE1Q9NZC3 331 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 KCNG2Q9UJ96 466 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 PURGQ9UJV8 347 aaKnown RBP10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 MRPS33Q9Y291 106 aaKnown RBP10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 NOP16Q9Y3C1 178 aaKnown RBP10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 TGFBR3LH3BV60 316 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 RNH1P13489 461 aaKnown RBP10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 HPGDP15428 266 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 PBX2P40425 430 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 DHRS2Q13268 280 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 SLC17A1Q14916 467 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 TAF13Q15543 124 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 UQCC3Q6UW78 93 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 OR2W3Q7Z3T1 314 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 PLPP7Q8NBV4 271 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 OR1J4Q8NGS1 313 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 C16orf52Q8NHV5 167 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 ASB12Q8WXK4 309 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 ATOH1Q92858 354 aaPredicted RBP10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 CRISPLD2Q9H0B8 497 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 OR10A5Q9H207 317 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 SYT4Q9H2B2 425 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 CKLFQ9UBR5 152 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 GTF2A1LQ9UNN4 478 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 DHDHQ9UQ10 334 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 OR14I1A6ND48 311 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 TMEM200CA6NKL6 621 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 ZNF736B4DX44 427 aaPredicted RBP10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 SIGLEC6O43699 453 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 MTRF1O75570 445 aaKnown RBP10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 GPANK1O95872 356 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 HTR2CP28335 458 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 DLSTP36957 453 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 GPR3P46089 330 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 EGR4Q05215 589 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 SRSF5Q13243 272 aaKnown RBP10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 NR0B2Q15466 257 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 MEP1BQ16820 701 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 TMEM184AQ6ZMB5 413 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 ACOT7LQ6ZUV0 252 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 BPIFB2Q8N4F0 458 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 ASB17Q8WXJ9 295 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 EDEM2Q9BV94 578 aa10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 ZNF107Q9UII5 783 aaPredicted RBP10.68□□□□□ -0.7
VIPAS39-211ENST00000557658 FAM221BA6H8Z2 402 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 PCP4L1A6NKN8 68 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 OIP5O43482 229 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 HLA-DQA2P01906 255 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 CD2P06729 351 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 ARHGDIBP52566 201 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 PPIAP62937 165 aaKnown RBP10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 SNTB1Q13884 538 aaKnown RBP10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 SCGB2B2Q4G0G5 96 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 PAN3Q58A45 887 aaKnown RBP10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 TMEM225Q6GV28 225 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 OOSP2Q86WS3 158 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 PM20D2Q8IYS1 436 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 PHOSPHO1Q8TCT1 267 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 RNF128Q8TEB7 428 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 SLC25A28Q96A46 364 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 ZBTB8AQ96BR9 441 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 KTI12Q96EK9 354 aaPredicted RBP10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 SLC41A2Q96JW4 573 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 ZNF75AQ96N20 296 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 ZNF587Q96SQ5 575 aaPredicted RBP10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 SAV1Q9H4B6 383 aaPredicted RBP10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 PRTFDC1Q9NRG1 225 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms