RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 CTLA4P16410 223 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 MSR1P21757 451 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 PEX2P28328 305 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 LAP3P28838 519 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 PCBD1P61457 104 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 LSM6P62312 80 aaKnown RBP12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 KEAP1Q14145 624 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 DAZAP2Q15038 168 aaPredicted RBP12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 PPA1Q15181 289 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 SNAPC1Q16533 368 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 KCNMB1Q16558 191 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 SLC36A2Q495M3 483 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 SLC35D3Q5M8T2 416 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 SLC35F1Q5T1Q4 408 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 TTC23Q5W5X9 447 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 ACSM5Q6NUN0 579 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 MEX3BQ6ZN04 569 aaKnown RBP12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 WDFY1Q8IWB7 410 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 DEPDC4Q8N2C3 294 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 SLC22A24Q8N4F4 322 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 SLC37A3Q8NCC5 494 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 SDR9C7Q8NEX9 313 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 OR8J1Q8NGP2 316 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 PITX2Q99697 317 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 SLC29A1Q99808 456 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 NUAK2Q9H093 628 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 RIBC2Q9H4K1 309 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 B9D1Q9UPM9 204 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 IGLV1-36A0A0B4J1U3 117 aa12.36□□□□□ -0.43
SUPT16H-208ENST00000557652 OR6C68A6NDL8 312 aa12.36□□□□□ -0.43
SUPT16H-208ENST00000557652 SLC2A10O95528 541 aa12.36□□□□□ -0.43
SUPT16H-208ENST00000557652 ATP6V1G2O95670 118 aa12.36□□□□□ -0.43
SUPT16H-208ENST00000557652 CST2P09228 141 aa12.36□□□□□ -0.43
SUPT16H-208ENST00000557652 COX6B1P14854 86 aa12.36□□□□□ -0.43
SUPT16H-208ENST00000557652 CRYGSP22914 178 aa12.36□□□□□ -0.43
SUPT16H-208ENST00000557652 ARR3P36575 388 aa12.36□□□□□ -0.43
SUPT16H-208ENST00000557652 NR1H2P55055 460 aa12.36□□□□□ -0.43
SUPT16H-208ENST00000557652 FMODQ06828 376 aa12.36□□□□□ -0.43
SUPT16H-208ENST00000557652 TMED1Q13445 227 aa12.36□□□□□ -0.43
SUPT16H-208ENST00000557652 CRMP1Q14194 572 aa12.36□□□□□ -0.43
SUPT16H-208ENST00000557652 TAB1Q15750 504 aa12.36□□□□□ -0.43
SUPT16H-208ENST00000557652 SLC25A30Q5SVS4 291 aa12.36□□□□□ -0.43
SUPT16H-208ENST00000557652 ANKRD34AQ69YU3 496 aa12.36□□□□□ -0.43
SUPT16H-208ENST00000557652 IQCF1Q8N6M8 205 aa12.36□□□□□ -0.43
SUPT16H-208ENST00000557652 ZNF555Q8NEP9 628 aa12.36□□□□□ -0.43
SUPT16H-208ENST00000557652 IL17RDQ8NFM7 739 aa12.36□□□□□ -0.43
SUPT16H-208ENST00000557652 WFIKKN1Q96NZ8 548 aa12.36□□□□□ -0.43
SUPT16H-208ENST00000557652 C1orf198Q9H425 327 aa12.36□□□□□ -0.43
SUPT16H-208ENST00000557652 RPRD1BQ9NQG5 326 aaKnown RBP12.36□□□□□ -0.43
SUPT16H-208ENST00000557652 PLEKHB1Q9UF11 243 aaPredicted RBP12.36□□□□□ -0.43
SUPT16H-208ENST00000557652 NDRG4Q9ULP0 352 aaKnown RBP12.36□□□□□ -0.43
SUPT16H-208ENST00000557652 UGT2A1Q9Y4X1 527 aa12.36□□□□□ -0.43
SUPT16H-208ENST00000557652 SLC25A15Q9Y619 301 aa12.36□□□□□ -0.43
SUPT16H-208ENST00000557652 ADGRG4Q8IZF6 3080 aa12.36□□□□□ -0.43
SUPT16H-208ENST00000557652 BAHCC1Q9P281 2608 aa12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 SNTNA6NMZ2 147 aa12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 C12orf71A8MTZ7 269 aa12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 H0YAE9 185 aa12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 H7C1C5 153 aa12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 PTHP01270 115 aa12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 B4GALT1P15291 398 aa12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 GRNP28799 593 aaKnown RBP12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 GGT2P36268 569 aa12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 FOXG1P55316 489 aaPredicted RBP12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 LCN6P62502 163 aa12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 EFNB1P98172 346 aa12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 HSF2Q03933 536 aa12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 IL18R1Q13478 541 aa12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 BEX5Q5H9J7 111 aa12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 MEDAGQ5VYS4 303 aa12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 SP5Q6BEB4 398 aaPredicted RBP12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 TMEM53Q6P2H8 277 aa12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 GID4Q8IVV7 300 aa12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 OR6V1Q8N148 313 aa12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 TMEM163Q8TC26 289 aa12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 IPCEF1Q8WWN9 437 aaPredicted RBP12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 NABP1Q96AH0 204 aa12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 ZNF837Q96EG3 531 aaPredicted RBP12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 RADILQ96JH8 1075 aa12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 TOR3AQ9H497 397 aa12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 POLE4Q9NR33 117 aa12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 IMPAD1Q9NX62 359 aa12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 TVP23BQ9NYZ1 205 aa12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 CRNNQ9UBG3 495 aaPredicted RBP12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 NKX1-2Q9UD57 310 aaPredicted RBP12.35□□□□□ -0.43
SUPT16H-208ENST00000557652 LOC100130705A0A1B0GUX0 176 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 C19orf84I3L1E1 186 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 TMCC2O75069 709 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 SNAP29O95721 258 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 IGKV3-15P01624 115 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 CBR1P16152 277 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 SPI1P17947 270 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 PTAFRP25105 342 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 FMO3P31513 532 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 HSPA13P48723 471 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 SNRPGP62308 76 aaKnown RBP12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 SCRN3Q0VDG4 424 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 AQP6Q13520 282 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 GSG1Q2KHT4 349 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 LCN1P1Q5VSP4 162 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms