RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 TMEM191AQ9H0A3 160 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 APOBEC3BQ9UH17 382 aaKnown RBP8.18□□□□□ -1.1
SYNE3-205ENST00000557275 KCND3Q9UK17 655 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 CA14Q9ULX7 337 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 AMDHD2Q9Y303 409 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 DIP2CQ9Y2E4 1556 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 TRAV20A0A0B4J274 112 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 BLVRBP30043 206 aaPredicted RBP8.18□□□□□ -1.1
SYNE3-205ENST00000557275 DOLPP1Q86YN1 238 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 MFSD4AQ8N468 514 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 OR10X1Q8NGY0 326 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 FBXL2Q9UKC9 423 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 NDRG4Q9ULP0 352 aaKnown RBP8.18□□□□□ -1.1
SYNE3-205ENST00000557275 PIGLQ9Y2B2 252 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 SMCHD1A6NHR9 2005 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 SSTR4P31391 388 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 ZNF787Q6DD87 383 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 PLXDC2Q6UX71 529 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 OR52N1Q8NH53 320 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 PIGCQ92535 297 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 ADGRG7Q96K78 797 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 SLC25A18Q9H1K4 315 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 MRPS28Q9Y2Q9 187 aaKnown RBP8.18□□□□□ -1.1
SYNE3-205ENST00000557275 LIMS3P0CW19 117 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 LIMS4P0CW20 117 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 SULT1A3P0DMM9 295 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 SULT1A4P0DMN0 295 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 ADPRMQ3LIE5 342 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 TOR2AQ5JU69 321 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 PRAMEF19Q5SWL8 479 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 DNAJC5GQ8N7S2 189 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 MFSD9Q8NBP5 474 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 SELENOIQ9C0D9 397 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 B3GALT5Q9Y2C3 310 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 A0A1W2PPQ1 181 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 FDXRP22570 491 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 OR1D4P47884 311 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 FAM3DQ96BQ1 224 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 PHYHIPLQ96FC7 376 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 MAP1LC3CQ9BXW4 147 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 ZFAND5O76080 213 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 OPN1MWP04001 364 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 OPN1MW2P0DN77 364 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 OPN1MW3P0DN78 364 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 HLA-BQ31612 363 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 MFSD12Q6NUT3 480 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 OR4F15Q8NGB8 312 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 CNIH4Q9P003 139 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 DNAJC15Q9Y5T4 150 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 G3V3Y1 287 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 H3BML4 177 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 DCTN6O00399 190 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 GATCO43716 136 aaKnown RBP8.17□□□□□ -1.1
SYNE3-205ENST00000557275 TYRP1P17643 537 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 CD1CP29017 333 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 OR2B8PP59922 312 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 TSPAN31Q12999 210 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 SLC35G1Q2M3R5 365 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 TP53I3Q53FA7 332 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 C17orf107Q6ZR85 190 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 RTL10Q7L3V2 364 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 OR8J2Q8NGG1 315 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 MBD3L1Q8WWY6 194 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 RPL3LQ92901 407 aaKnown RBP8.17□□□□□ -1.1
SYNE3-205ENST00000557275 TRAPPC1Q9Y5R8 145 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 C3P01024 1663 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 POLR2AP24928 1970 aaKnown RBP8.17□□□□□ -1.1
SYNE3-205ENST00000557275 GHRHP01286 108 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 HTR1FP30939 366 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 PRR27Q6MZM9 219 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 ARFGAP1Q8N6T3 406 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 OR10G3Q8NGC4 313 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 OR1L1Q8NH94 360 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 CXorf49A8MYA2 514 aaPredicted RBP8.17□□□□□ -1.1
SYNE3-205ENST00000557275 HAND1O96004 215 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 TFAP2AP05549 437 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 AHRP35869 848 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 BCL7AQ4VC05 210 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 TREML2Q5T2D2 321 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 STUMQ69YW2 141 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 OR1L3Q8NH93 324 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 SLCO4A1Q96BD0 722 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 LRIT1Q9P2V4 623 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 ING1Q9UK53 422 aaPredicted RBP8.17□□□□□ -1.1
SYNE3-205ENST00000557275 Q9Y3F1 56 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 TIMM9Q9Y5J7 89 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 LIPCP11150 499 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 AOAHP28039 575 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 DOC2AQ14183 400 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 BEX5Q5H9J7 111 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 ZNF595Q8IYB9 648 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 RPUSD4Q96CM3 377 aaKnown RBP8.17□□□□□ -1.1
SYNE3-205ENST00000557275 KIF13BQ9NQT8 1826 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 HES1Q14469 280 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 SLC39A7Q92504 469 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 COL25A1Q9BXS0 654 aaPredicted RBP8.17□□□□□ -1.1
SYNE3-205ENST00000557275 A0A1W2PRU2 124 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 OR13C7P0DN81 318 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 CD37P11049 281 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 FLT3LGP49771 235 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms