RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 OR10K2Q6IF99 312 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 PARM1Q6UWI2 310 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 MDGA2Q7Z553 956 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 BEST3Q8N1M1 668 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 AVL9Q8NBF6 648 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 STEAP2Q8NFT2 490 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 OR1J2Q8NGS2 313 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 TAAR8Q969N4 342 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 LRRC46Q96FV0 321 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 C4orf45Q96LM5 186 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 ZNF75AQ96N20 296 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 INTS14Q96SY0 518 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 GDE1Q9NZC3 331 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 CGGBP1Q9UFW8 167 aaPredicted RBP10.3□□□□□ -0.76
SRP54-213ENST00000556994 SLC6A5Q9Y345 797 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 A0A1W2PQF6 199 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 DNASE2O00115 360 aaPredicted RBP10.29□□□□□ -0.76
SRP54-213ENST00000556994 CDC40O60508 579 aaKnown RBP eCLIP10.29□□□□□ -0.76
SRP54-213ENST00000556994 SRPX2O60687 465 aaPredicted RBP10.29□□□□□ -0.76
SRP54-213ENST00000556994 PRAMEF2O60811 474 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 AMY2AP04746 511 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 ITGB2P05107 769 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 HOXB2P14652 356 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 PRKACAP17612 351 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 NTSR1P30989 418 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 GPR3P46089 330 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 LUMP51884 338 aaPredicted RBP10.29□□□□□ -0.76
SRP54-213ENST00000556994 RIPPLY1Q0D2K3 151 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 EIF2B5Q13144 721 aaKnown RBP10.29□□□□□ -0.76
SRP54-213ENST00000556994 SQSTM1Q13501 440 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 TAF13Q15543 124 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 KLHL26Q53HC5 615 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 LIN54Q6MZP7 749 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 ZNF321PQ8N8H1 164 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 OR1J4Q8NGS1 313 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 ZNF563Q8TA94 476 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 GPX8Q8TED1 209 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 SLC37A2Q8TED4 501 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 ELSPBP1Q96BH3 223 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 SEH1LQ96EE3 360 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 NARS2Q96I59 477 aaKnown RBP10.29□□□□□ -0.76
SRP54-213ENST00000556994 PRTFDC1Q9NRG1 225 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 TAS2R3Q9NYW6 316 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 TRIOO75962 3097 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 NUP210LQ5VU65 1888 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 LOC100289279A0A1B0GTE1 492 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 KCNAB3O43448 404 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 WISP1O95388 367 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 RENP00797 406 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 ZNF28P17035 718 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 STARP49675 285 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 MPPED2Q15777 294 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 NKPD1Q17RQ9 610 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 GLYATL3Q5SZD4 288 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 PRR22Q8IZ63 422 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 OR4S1Q8NGB4 309 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 SLC19A3Q9BZV2 496 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 TWSG1Q9GZX9 223 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 CLDN16Q9Y5I7 305 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 DOCK8Q8NF50 2099 aa10.29□□□□□ -0.76
SRP54-213ENST00000556994 DCDC2BA2VCK2 349 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 OR5H14A6NHG9 310 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 SLC17A2O00624 439 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 ZNF432O94892 652 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 KLF8O95600 359 aaPredicted RBP10.28□□□□□ -0.76
SRP54-213ENST00000556994 TACR3P29371 465 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 PBX2P40425 430 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 PSMD4P55036 377 aaKnown RBP10.28□□□□□ -0.76
SRP54-213ENST00000556994 RASGEF1BQ0VAM2 473 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 C1orf61Q13536 156 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 MOGAT2Q3SYC2 334 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 MANEAQ5SRI9 462 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 EEF1A1P5Q5VTE0 462 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 EIF4E3Q8N5X7 224 aaKnown RBP10.28□□□□□ -0.76
SRP54-213ENST00000556994 BPIFCQ8NFQ6 507 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 OR51A2Q8NGJ7 313 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 SLC25A36Q96CQ1 311 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 PDCD10Q9BUL8 212 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 RTN4RQ9BZR6 473 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 OBP2AQ9NY56 170 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 MRPS18BQ9Y676 258 aaKnown RBP10.28□□□□□ -0.76
SRP54-213ENST00000556994 FITM1A5D6W6 292 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 EIF4E2O60573 245 aaKnown RBP10.28□□□□□ -0.76
SRP54-213ENST00000556994 PMS2P2O95744 297 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 POU2F2P09086 479 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 PNMTP11086 282 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 RNH1P13489 461 aaKnown RBP10.28□□□□□ -0.76
SRP54-213ENST00000556994 MGMTP16455 207 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 EGR3Q06889 387 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 MFGE8Q08431 387 aaPredicted RBP10.28□□□□□ -0.76
SRP54-213ENST00000556994 SKP2Q13309 424 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 GPM6BQ13491 265 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 TOMM34Q15785 309 aaPredicted RBP10.28□□□□□ -0.76
SRP54-213ENST00000556994 ATPAF1Q5TC12 328 aaPredicted RBP10.28□□□□□ -0.76
SRP54-213ENST00000556994 TMEM184AQ6ZMB5 413 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 Q6ZSR6 202 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 CD163Q86VB7 1156 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 OTOSQ8NHW6 89 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 NKD1Q969G9 470 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 FAM131CQ96AQ9 280 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms