RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 PLA1AQ53H76 456 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 ASPHD2Q6ICH7 369 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 C5orf46Q6UWT4 87 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 WDSUB1Q8N9V3 476 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 AGBL5Q8NDL9 886 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 ZNF486Q96H40 463 aaPredicted RBP9.07□□□□□ -0.96
TMEM260-211ENST00000556648 COMMD4Q9H0A8 199 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 TCF7L1Q9HCS4 588 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 DDX28Q9NUL7 540 aaKnown RBP9.07□□□□□ -0.96
TMEM260-211ENST00000556648 MRPL15Q9P015 296 aaKnown RBP9.07□□□□□ -0.96
TMEM260-211ENST00000556648 CAMK2AQ9UQM7 478 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 LRP12Q9Y561 859 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 CHCHD2Q9Y6H1 151 aaPredicted RBP9.07□□□□□ -0.96
TMEM260-211ENST00000556648 FREM3P0C091 2139 aa9.06□□□□□ -0.96
TMEM260-211ENST00000556648 TMEM212A6NML5 194 aa9.06□□□□□ -0.96
TMEM260-211ENST00000556648 G3V3Y1 287 aa9.06□□□□□ -0.96
TMEM260-211ENST00000556648 RAMP1O60894 148 aa9.06□□□□□ -0.96
TMEM260-211ENST00000556648 KLF7O75840 302 aaPredicted RBP9.06□□□□□ -0.96
TMEM260-211ENST00000556648 MT-ND4P03905 459 aa9.06□□□□□ -0.96
TMEM260-211ENST00000556648 SLC6A1P30531 599 aa9.06□□□□□ -0.96
TMEM260-211ENST00000556648 RCVRNP35243 200 aa9.06□□□□□ -0.96
TMEM260-211ENST00000556648 BIDP55957 195 aa9.06□□□□□ -0.96
TMEM260-211ENST00000556648 IFITM2Q01629 132 aa9.06□□□□□ -0.96
TMEM260-211ENST00000556648 MC2RQ01718 297 aa9.06□□□□□ -0.96
TMEM260-211ENST00000556648 CORO6Q6QEF8 472 aa9.06□□□□□ -0.96
TMEM260-211ENST00000556648 KRT77Q7Z794 578 aa9.06□□□□□ -0.96
TMEM260-211ENST00000556648 TMPRSS12Q86WS5 348 aa9.06□□□□□ -0.96
TMEM260-211ENST00000556648 ZNF679Q8IYX0 411 aa9.06□□□□□ -0.96
TMEM260-211ENST00000556648 SLC26A10Q8NG04 563 aa9.06□□□□□ -0.96
TMEM260-211ENST00000556648 RNF128Q8TEB7 428 aa9.06□□□□□ -0.96
TMEM260-211ENST00000556648 TSEN15Q8WW01 171 aaKnown RBP9.06□□□□□ -0.96
TMEM260-211ENST00000556648 TMEM106AQ96A25 262 aa9.06□□□□□ -0.96
TMEM260-211ENST00000556648 KCNK17Q96T54 332 aa9.06□□□□□ -0.96
TMEM260-211ENST00000556648 MARVELD1Q9BSK0 173 aa9.06□□□□□ -0.96
TMEM260-211ENST00000556648 WDR54Q9H977 334 aa9.06□□□□□ -0.96
TMEM260-211ENST00000556648 SERINC1Q9NRX5 453 aa9.06□□□□□ -0.96
TMEM260-211ENST00000556648 ALKBH4Q9NXW9 302 aa9.06□□□□□ -0.96
TMEM260-211ENST00000556648 PAIP2BQ9ULR5 123 aaKnown RBP9.06□□□□□ -0.96
TMEM260-211ENST00000556648 HS3ST3B1Q9Y662 390 aa9.06□□□□□ -0.96
TMEM260-211ENST00000556648 RALGAPA1Q6GYQ0 2036 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 EIF1AYO14602 144 aaKnown RBP9.05□□□□□ -0.96
TMEM260-211ENST00000556648 TRAPPC2P0DI81 140 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 TRAPPC2BP0DI82 140 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 SFTPDP35247 375 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 MMP15P51511 669 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 P2RY4P51582 365 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 RPS18P62269 152 aaKnown RBP9.05□□□□□ -0.96
TMEM260-211ENST00000556648 ROM1Q03395 351 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 MRPL28Q13084 256 aaKnown RBP9.05□□□□□ -0.96
TMEM260-211ENST00000556648 SLC25A53Q5H9E4 307 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 FDX2Q6P4F2 183 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 SLC23A3Q6PIS1 610 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 NHLRC1Q6VVB1 395 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 LINGO2Q7L985 606 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 GLB1L2Q8IW92 636 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 OR52N5Q8NH56 324 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 SYNPRQ8TBG9 265 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 GPR148Q8TDV2 347 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 CAPSLQ8WWF8 208 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 ASB17Q8WXJ9 295 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 RNF170Q96K19 258 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 MRGPRX4Q96LA9 322 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 IMMP1LQ96LU5 166 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 OR5B2Q96R09 309 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 ZNF700Q9H0M5 742 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 RPH3AQ9Y2J0 694 aaPredicted RBP9.05□□□□□ -0.96
TMEM260-211ENST00000556648 TRAV6A0A075B6T7 132 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 A6NIZ1 184 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 INMT-MINDY4F8WBC2 141 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 GPR171O14626 319 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 LMX1BO60663 402 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 SRSF10O75494 262 aaKnown RBP9.05□□□□□ -0.96
TMEM260-211ENST00000556648 CCL3P10147 92 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 ARSBP15848 533 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 CSRP1P21291 193 aaKnown RBP9.05□□□□□ -0.96
TMEM260-211ENST00000556648 MAPK3P27361 379 aaPredicted RBP9.05□□□□□ -0.96
TMEM260-211ENST00000556648 HLA-DMAP28067 261 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 PTH2RP49190 550 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 DAP3P51398 398 aaKnown RBP9.05□□□□□ -0.96
TMEM260-211ENST00000556648 DUSP3P51452 185 aaPredicted RBP9.05□□□□□ -0.96
TMEM260-211ENST00000556648 CCR6P51684 374 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 RAP1BP61224 184 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 RAP1AP62834 184 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 GLO1Q04760 184 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 RASGEF1BQ0VAM2 473 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 SNTA1Q13424 505 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 KLF9Q13886 244 aaPredicted RBP9.05□□□□□ -0.96
TMEM260-211ENST00000556648 ZFP69Q49AA0 526 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 NCCRP1Q6ZVX7 275 aaPredicted RBP9.05□□□□□ -0.96
TMEM260-211ENST00000556648 NDUFAF7Q7L592 441 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 DCXRQ7Z4W1 244 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 BIVMQ86UB2 503 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 CATSPERDQ86XM0 798 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 DND1Q8IYX4 353 aaKnown RBP9.05□□□□□ -0.96
TMEM260-211ENST00000556648 TOMM5Q8N4H5 51 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 FADS6Q8N9I5 356 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 ZNF248Q8NDW4 579 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 OR4K17Q8NGC6 315 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 ST7LQ8TDW4 575 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 ADAMTS14Q8WXS8 1223 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms