RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 ZNF300Q96RE9 604 aaPredicted RBP4.57□□□□□ -1.68
SRP54-211ENST00000556445 GFI1Q99684 422 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 PSD2Q9BQI7 771 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 CHRNA10Q9GZZ6 450 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 GLIPR2Q9H4G4 154 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 RGCCQ9H4X1 137 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 ARMC7Q9H6L4 198 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 TMEM185BQ9H7F4 350 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 ANKHQ9HCJ1 492 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 BCL2L10Q9HD36 194 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 CCNB1IP1Q9NPC3 277 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 SDHAF3Q9NRP4 125 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 TEX10Q9NXF1 929 aaPredicted RBP4.57□□□□□ -1.68
SRP54-211ENST00000556445 SEC14L3Q9UDX4 400 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 NDRG3Q9UGV2 375 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 PILRAQ9UKJ1 303 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 CES1P1Q9UKY3 287 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 POMT2Q9UKY4 750 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 RAB23Q9ULC3 237 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 POFUT2Q9Y2G5 429 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 TPRKBQ9Y3C4 175 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 CSNK1G3Q9Y6M4 447 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 ENPP4Q9Y6X5 453 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 TRAV26-1A0A087WT03 109 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 A0A0G2JN53 185 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 LOC100130705A0A1B0GUX0 176 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 TLCD2A6NGC4 264 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 OR6C65A6NJZ3 312 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 B4DGG1 531 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 LMO7DNF2Z398 122 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 H0YGG7 62 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 hCG_2039718K7EN88 272 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 M0QZ24 198 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 HMGN4O00479 90 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 BCKDKO14874 412 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 ARPC3O15145 178 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 AQP9O43315 295 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 RNF13O43567 381 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 SLC28A2O43868 658 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 MPZL2O60487 215 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 SNRNP200O75643 2136 aaKnown RBP4.56□□□□□ -1.68
SRP54-211ENST00000556445 DFFBO76075 338 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 CCNB2O95067 398 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 GADD45GO95257 159 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 EML2O95834 649 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 APOA1P02647 267 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 TFAP2AP05549 437 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 IGFBP1P08833 259 aaPredicted RBP4.56□□□□□ -1.68
SRP54-211ENST00000556445 TFPTP0C1Z6 253 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 PTNP21246 168 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 MSR1P21757 451 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 SOX2P48431 317 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 HLCSP50747 726 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 CDK9P50750 372 aaKnown RBP4.56□□□□□ -1.68
SRP54-211ENST00000556445 LIM2P55344 173 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 RAB38P57729 211 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 RAB8AP61006 207 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 SNRPEP62304 92 aaKnown RBP4.56□□□□□ -1.68
SRP54-211ENST00000556445 RPS15P62841 145 aaKnown RBP4.56□□□□□ -1.68
SRP54-211ENST00000556445 HPCAP84074 193 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 VLDLRP98155 873 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 FAM53BQ14153 422 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 NCF4Q15080 339 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 ZSWIM7Q19AV6 140 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 MICAQ29983 383 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 ZNF829Q3KNS6 432 aaPredicted RBP4.56□□□□□ -1.68
SRP54-211ENST00000556445 EIPR1Q53HC9 387 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.56□□□□□ -1.68
SRP54-211ENST00000556445 ZNF770Q6IQ21 691 aaPredicted RBP4.56□□□□□ -1.68
SRP54-211ENST00000556445 FAM166AQ6J272 317 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 PYHIN1Q6K0P9 492 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 FAHD1Q6P587 224 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 TNFAIP8L2Q6P589 184 aaPredicted RBP4.56□□□□□ -1.68
SRP54-211ENST00000556445 TBPL2Q6SJ96 375 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 ZNF600Q6ZNG1 722 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 VTCN1Q7Z7D3 282 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 C10orf111Q8N326 155 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 CSNK1A1LQ8N752 337 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 TTC29Q8NA56 475 aaPredicted RBP4.56□□□□□ -1.68
SRP54-211ENST00000556445 OR52N4Q8NGI2 321 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 FAM110BQ8TC76 370 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 LMX1AQ8TE12 382 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 SAP25Q8TEE9 199 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 GLYATL2Q8WU03 294 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 PHF10Q8WUB8 498 aaKnown RBP4.56□□□□□ -1.68
SRP54-211ENST00000556445 DNASE2BQ8WZ79 361 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 SGK3Q96BR1 496 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 CNRIP1Q96F85 164 aaPredicted RBP4.56□□□□□ -1.68
SRP54-211ENST00000556445 COQ2Q96H96 371 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 TMEM19Q96HH6 336 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 ZNF354BQ96LW1 612 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 ZNF578Q96N58 590 aaPredicted RBP4.56□□□□□ -1.68
SRP54-211ENST00000556445 MS4A4EQ96PG1 132 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 TRNT1Q96Q11 434 aaKnown RBP4.56□□□□□ -1.68
SRP54-211ENST00000556445 TSC22D3Q99576 134 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 CDX2Q99626 313 aaPredicted RBP4.56□□□□□ -1.68
SRP54-211ENST00000556445 MAPKAP1Q9BPZ7 522 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 PELOQ9BRX2 385 aaKnown RBP4.56□□□□□ -1.68
SRP54-211ENST00000556445 WACQ9BTA9 647 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 CHRDL1Q9BU40 450 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms