RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 FCMRO60667 390 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 PRAMEF2O60811 474 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 RP2O75695 350 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 SLC22A5O76082 557 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 LDOC1O95751 146 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-241ENST00000556374 GPR75O95800 540 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 PAK4O96013 591 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-241ENST00000556374 PAHP00439 452 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 RENP00797 406 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 MT-ND4P03905 459 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 RAF1P04049 648 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 HIST1H2ABP04908 130 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 CD1AP06126 327 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 ANXA2P07355 339 aaKnown RBP3.98□□□□□ -1.77
ATXN3-241ENST00000556374 CD3GP09693 182 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 RAB40ALP0C0E4 278 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 TBC1D3HP0C7X1 549 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 ZNF806P0C7X5 589 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 SULT1A3P0DMM9 295 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 SULT1A4P0DMN0 295 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 CALCBP10092 127 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 CEACAM1P13688 526 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 HOXB2P14652 356 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 HPGDP15428 266 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 M6PRP20645 277 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 HTR2AP28223 471 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 PEBP1P30086 187 aaKnown RBP3.98□□□□□ -1.77
ATXN3-241ENST00000556374 MAT2AP31153 395 aaKnown RBP3.98□□□□□ -1.77
ATXN3-241ENST00000556374 AKT2P31751 481 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 GABRA3P34903 492 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 NAA10P41227 235 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-241ENST00000556374 CCR9P51686 369 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 ZNF136P52737 540 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 ADPRHP54922 357 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 RAB38P57729 211 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 CLDN2P57739 230 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 GMFBP60983 142 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 TSPAN5P62079 268 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 ZNF85Q03923 595 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 SRSF5Q13243 272 aaKnown RBP3.98□□□□□ -1.77
ATXN3-241ENST00000556374 ENPP2Q13822 863 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 GGTLC2Q14390 218 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 HSPB2Q16082 182 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 ITPRIPL2Q3MIP1 535 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 TP53I3Q53FA7 332 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 PLA1AQ53H76 456 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 ELFN2Q5R3F8 820 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 MANEAQ5SRI9 462 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 FAM205BPQ63HN1 556 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 DMKNQ6E0U4 476 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-241ENST00000556374 TBC1D3CQ6IPX1 549 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 TCEAL6Q6IPX3 200 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 ULK3Q6PHR2 472 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 C11orf88Q6PI97 169 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 ENPP7Q6UWV6 458 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 KIAA1324Q6UXG2 1013 aaKnown RBP3.98□□□□□ -1.77
ATXN3-241ENST00000556374 B3GLCTQ6Y288 498 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 TRILQ7L0X0 811 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 HIST3H2AQ7L7L0 130 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 KRT77Q7Z794 578 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 SIAH3Q8IW03 269 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 TIGD4Q8IY51 512 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 TBC1D3Q8IZP1 549 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-241ENST00000556374 OR4N4Q8N0Y3 316 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 OR6V1Q8N148 313 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 FTMTQ8N4E7 242 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 CSNK1A1LQ8N752 337 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 CYB561A3Q8NBI2 242 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 SEMA6DQ8NFY4 1073 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 OR52R1Q8NGF1 315 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 OR52E2Q8NGJ4 325 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 OR5J2Q8NH18 312 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 OR51A7Q8NH64 312 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 MOSPD2Q8NHP6 518 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 SMIM4Q8WVI0 70 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 RAB40AQ8WXH6 277 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 THAP4Q8WY91 577 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 GHSRQ92847 366 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 HIST1H2ACQ93077 130 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 HGDQ93099 445 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 TCEAL3Q969E4 200 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 ZNF707Q96C28 371 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-241ENST00000556374 ZMYND19Q96E35 227 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-241ENST00000556374 S100A16Q96FQ6 103 aaKnown RBP3.98□□□□□ -1.77
ATXN3-241ENST00000556374 DGAT2Q96PD7 388 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 CCNL2Q96S94 520 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-241ENST00000556374 TEAD3Q99594 435 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 DHRS9Q9BPW9 319 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 PRSS27Q9BQR3 290 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 GINS4Q9BRT9 223 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 LMF2Q9BU23 707 aaKnown RBP3.98□□□□□ -1.77
ATXN3-241ENST00000556374 GSDMCQ9BYG8 508 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 TTTY10Q9BZA0 68 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 ARRDC1-AS1Q9H2J1 176 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 LDAHQ9H6V9 325 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 ERVMER34-1Q9H9K5 563 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 PLEKHA1Q9HB21 404 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 ADGRL4Q9HBW9 690 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 ZC4H2Q9NQZ6 224 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 POT1Q9NUX5 634 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms