RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 FAM122BQ7Z309 247 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 DCXRQ7Z4W1 244 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 CCDC50Q8IVM0 306 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 CCDC36Q8IYA8 594 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 FAM71AQ8IYT1 594 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 TBC1D19Q8N5T2 526 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 OR2A12Q8NGT7 310 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 OR6K2Q8NGY2 324 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 LKAAEAR1Q8TD35 194 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 CD300LFQ8TDQ1 290 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 ADAMTS16Q8TE57 1224 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 CORO2AQ92828 525 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 TMEM186Q96B77 213 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 KLF6Q99612 283 aaPredicted RBP3.45□□□□□ -1.86
PRPF39-209ENST00000556353 DHRS9Q9BPW9 319 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 PAXXQ9BUH6 204 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 PKIBQ9C010 78 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 OR51B5Q9H339 312 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 TCEAL2Q9H3H9 227 aaPredicted RBP3.45□□□□□ -1.86
PRPF39-209ENST00000556353 AMBNQ9NP70 447 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 DNAJC11Q9NVH1 559 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 DDIT4Q9NX09 232 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 ZNF319Q9P2F9 582 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 SPASTQ9UBP0 616 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 SCML1Q9UN30 329 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 PACSIN2Q9UNF0 486 aaPredicted RBP3.45□□□□□ -1.86
PRPF39-209ENST00000556353 FAM32AQ9Y421 112 aaKnown RBP3.45□□□□□ -1.86
PRPF39-209ENST00000556353 NUP210LQ5VU65 1888 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 PCM1Q15154 2024 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 C5orf52A6NGY3 159 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 ANKDD1BA6NHY2 528 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 F8WDY8 70 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 ALOX15BO15296 676 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 SLC31A1O15431 190 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 AKR7A2O43488 359 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 LCA5LO95447 670 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 TGFAP01135 160 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 IGHG3P01860 377 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 HSMCR30P0CW71 290 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 CYP11B1P15538 503 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 TCN1P20061 433 aaPredicted RBP3.44□□□□□ -1.86
PRPF39-209ENST00000556353 PTPN6P29350 595 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 TIA1P31483 386 aaKnown RBP eCLIP3.44□□□□□ -1.86
PRPF39-209ENST00000556353 MDH2P40926 338 aaKnown RBP3.44□□□□□ -1.86
PRPF39-209ENST00000556353 SERPINH1P50454 418 aaKnown RBP3.44□□□□□ -1.86
PRPF39-209ENST00000556353 SMSP52788 366 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 SNU13P55769 128 aaKnown RBP3.44□□□□□ -1.86
PRPF39-209ENST00000556353 CLDN8P56748 225 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 C21orf59P57076 290 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 ERVPABLB-1P60509 514 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 SEMG2Q02383 582 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 PLOD1Q02809 727 aaPredicted RBP3.44□□□□□ -1.86
PRPF39-209ENST00000556353 ZNF33BQ06732 778 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 OVGP1Q12889 678 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 SRSF6Q13247 344 aaKnown RBP3.44□□□□□ -1.86
PRPF39-209ENST00000556353 FZD2Q14332 565 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 RABGAP1LQ5R372 815 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 CCNJQ5T5M9 372 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 ARMC12Q5T9G4 340 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 KHDRBS2Q5VWX1 349 aaKnown RBP3.44□□□□□ -1.86
PRPF39-209ENST00000556353 LYPLAL1Q5VWZ2 237 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 PRMT9Q6P2P2 845 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 LRRC70Q7Z2Q7 622 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 SYVN1Q86TM6 617 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 HORMAD1Q86X24 394 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 CLEC4FQ8N1N0 589 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 SFRP1Q8N474 314 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 COMMD1Q8N668 190 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 FNDC5Q8NAU1 212 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 ZNF397Q8NF99 534 aaPredicted RBP3.44□□□□□ -1.86
PRPF39-209ENST00000556353 OR8J2Q8NGG1 315 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 OR4C6Q8NH72 309 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 CAPSLQ8WWF8 208 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 OR8D1Q8WZ84 308 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 NTNG2Q96CW9 530 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 RMND5BQ96G75 393 aaPredicted RBP3.44□□□□□ -1.86
PRPF39-209ENST00000556353 SAMD8Q96LT4 415 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 SDHCQ99643 169 aaPredicted RBP3.44□□□□□ -1.86
PRPF39-209ENST00000556353 OMDQ99983 421 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 NDEL1Q9GZM8 345 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 DERL2Q9GZP9 239 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 FAM192AQ9GZU8 254 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 GANQ9H2C0 597 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 SYTL2Q9HCH5 934 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 NGBQ9NPG2 151 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 ASCL3Q9NQ33 180 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 GDF3Q9NR23 364 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 SAMSN1Q9NSI8 373 aaKnown RBP3.44□□□□□ -1.86
PRPF39-209ENST00000556353 NKIRAS1Q9NYS0 192 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 CNIH4Q9P003 139 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 PSMC3IPQ9P2W1 217 aaPredicted RBP3.44□□□□□ -1.86
PRPF39-209ENST00000556353 TRPC4Q9UBN4 977 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 CTSFQ9UBX1 484 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 APOBEC3BQ9UH17 382 aaKnown RBP3.44□□□□□ -1.86
PRPF39-209ENST00000556353 RWDD2AQ9UIY3 292 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 DNPEPQ9ULA0 475 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 ERGIC3Q9Y282 383 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 PLEKHA6Q9Y2H5 1048 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 NTNG1Q9Y2I2 539 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 PUS1Q9Y606 427 aaKnown RBP eCLIP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms