RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 HNF1AP20823 631 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 PTDSS1P48651 473 aaKnown RBP5.78□□□□□ -1.48
PSEN1-216ENST00000556066 CSNK1A1P48729 337 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 PPOXP50336 477 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 BIDP55957 195 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 RBBP4Q09028 425 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 NFYCQ13952 458 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 SELPLGQ14242 412 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 RCN1Q15293 331 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 TRMT5Q32P41 509 aaKnown RBP5.78□□□□□ -1.48
PSEN1-216ENST00000556066 RUNDC3AQ59EK9 446 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 ENTPD8Q5MY95 495 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 ZNF613Q6PF04 617 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 PTOV1Q86YD1 416 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 RBM45Q8IUH3 476 aaKnown RBP5.78□□□□□ -1.48
PSEN1-216ENST00000556066 WDFY1Q8IWB7 410 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 CDK20Q8IZL9 346 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 SCAIQ8N9R8 606 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 ZNF540Q8NDQ6 660 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 IL17RDQ8NFM7 739 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 OR6T1Q8NGN1 323 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 OR5J2Q8NH18 312 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 OR6S1Q8NH40 331 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 RP9Q8TA86 221 aaKnown RBP5.78□□□□□ -1.48
PSEN1-216ENST00000556066 ADAMTS16Q8TE57 1224 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 FBLIM1Q8WUP2 373 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 NRG4Q8WWG1 115 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 STON2Q8WXE9 905 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 RCN3Q96D15 328 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 MSI2Q96DH6 328 aaKnown RBP5.78□□□□□ -1.48
PSEN1-216ENST00000556066 SLC41A3Q96GZ6 507 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 RSRC1Q96IZ7 334 aaKnown RBP5.78□□□□□ -1.48
PSEN1-216ENST00000556066 CGREF1Q99674 301 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 DOK1Q99704 481 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 TMEM43Q9BTV4 400 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 TPK1Q9H3S4 243 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 ZNF442Q9H7R0 627 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 DCLRE1BQ9H816 532 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 NOX3Q9HBY0 568 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 MYOZ1Q9NP98 299 aaPredicted RBP5.78□□□□□ -1.48
PSEN1-216ENST00000556066 LPAR3Q9UBY5 353 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 REV1Q9UBZ9 1251 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 RABL2BQ9UNT1 228 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 CMAHPQ9Y471 501 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 GMEB1Q9Y692 573 aa5.78□□□□□ -1.48
PSEN1-216ENST00000556066 TMEM129A0AVI4 362 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 TRAPPC13A5PLN9 417 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 LYNX1G3V0Z9 82 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 SLC22A2O15244 555 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 CHP2O43745 196 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 FZD7O75084 574 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 STAMBPO95630 424 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 MT-ATP6P00846 226 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 HIST1H2ABP04908 130 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 PATE4P0C8F1 98 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 LYNX1P0DP58 116 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 UMPSP11172 480 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 ANPEPP15144 967 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 ZNF23P17027 643 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 TCN1P20061 433 aaPredicted RBP5.77□□□□□ -1.49
PSEN1-216ENST00000556066 CD247P20963 164 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 NR4A1P22736 598 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 IGFBP5P24593 272 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 NUDT2P50583 147 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 PCBP3P57721 371 aaKnown RBP5.77□□□□□ -1.49
PSEN1-216ENST00000556066 ACTR3P61158 418 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 RAB1AP62820 205 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 SRSF2Q01130 221 aaKnown RBP5.77□□□□□ -1.49
PSEN1-216ENST00000556066 GALK2Q01415 458 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 SLC34A1Q06495 639 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 CYLC2Q14093 348 aaPredicted RBP5.77□□□□□ -1.49
PSEN1-216ENST00000556066 CCNIQ14094 377 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 MELKQ14680 651 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 RAB39AQ14964 217 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 NPTX1Q15818 432 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 FAM120AOSQ5T036 256 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 C1orf146Q5VVC0 180 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 TTC33Q6PID6 262 aaPredicted RBP5.77□□□□□ -1.49
PSEN1-216ENST00000556066 WDR88Q6ZMY6 472 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 SLC35D2Q76EJ3 337 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 HIST3H2AQ7L7L0 130 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 PXKQ7Z7A4 578 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 PATL1Q86TB9 770 aaKnown RBP5.77□□□□□ -1.49
PSEN1-216ENST00000556066 DPP10Q8N608 796 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 LRRC17Q8N6Y2 441 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 GPR32P1Q8NGA4 272 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 OR8H1Q8NGG4 311 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 OR4D11Q8NGI4 311 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 OR10A6Q8NH74 314 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 NEU4Q8WWR8 484 aaPredicted RBP5.77□□□□□ -1.49
PSEN1-216ENST00000556066 HIST1H2ACQ93077 130 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 ZNF566Q969W8 418 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 LRR1Q96L50 414 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 SNX18Q96RF0 628 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 ARHGDIGQ99819 225 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 FOXB1Q99853 325 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 SYT3Q9BQG1 590 aa5.77□□□□□ -1.49
PSEN1-216ENST00000556066 MRPL37Q9BZE1 423 aaKnown RBP5.77□□□□□ -1.49
PSEN1-216ENST00000556066 KAT8Q9H7Z6 458 aaKnown RBP5.77□□□□□ -1.49
PSEN1-216ENST00000556066 EVA1AQ9H8M9 152 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms