RNA–Protein interactions for RNA: ENST00000555774.5

SHMT2-222, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,311 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-222ENST00000555774 GRINAQ7Z429 371 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 KRT77Q7Z794 578 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 C8orf44Q96CB5 159 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 OMA1Q96E52 524 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 ULBP3Q9BZM4 244 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 LMO7DNF2Z398 122 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 H0YC42 278 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 OR2T1O43869 369 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 NUDT14O95848 222 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 GPANK1O95872 356 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 FBLP22087 321 aaKnown RBP12.16□□□□□ -0.46
SHMT2-222ENST00000555774 NFYAP23511 347 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-222ENST00000555774 RPS27P42677 84 aaKnown RBP12.16□□□□□ -0.46
SHMT2-222ENST00000555774 MAP2K6P52564 334 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 HSD11B2P80365 405 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 INSM1Q01101 510 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-222ENST00000555774 PLA2G7Q13093 441 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 C2orf76Q3KRA6 126 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 C1orf140Q5VVS0 124 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 NKAIN2Q5VXU1 208 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 IDO2Q6ZQW0 420 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 RFPL4BQ6ZWI9 263 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 CATSPERDQ86XM0 798 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 MISPQ8IVT2 679 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 CDH26Q8IXH8 852 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 ZNF441Q8N8Z8 693 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 OR1N1Q8NGS0 311 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 OR8K3Q8NH51 312 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 PNPLA2Q96AD5 504 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 ELMOD3Q96FG2 381 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 ALX4Q9H161 411 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-222ENST00000555774 PCED1AQ9H1Q7 454 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 SCPEP1Q9HB40 452 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 MRPL22Q9NWU5 206 aaKnown RBP12.16□□□□□ -0.46
SHMT2-222ENST00000555774 TMA7Q9Y2S6 64 aaKnown RBP12.16□□□□□ -0.46
SHMT2-222ENST00000555774 A0A0A6YYH2 397 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 SLC22A23A1A5C7 686 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 A6NJ64 397 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 RHPN2P1A8MT19 583 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 METTL12A8MUP2 240 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 SLC16A7O60669 478 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 AHSA1O95433 338 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 ITGA5P08648 1049 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 SPARCP09486 303 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 VSIG10L2P0DP72 767 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 ARL4DP49703 201 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 EFNB2P52799 333 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 ZP2Q05996 745 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 YOD1Q5VVQ6 348 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-222ENST00000555774 C1QL3Q5VWW1 255 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 TMEM225Q6GV28 225 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 CHRDL2Q6WN34 429 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-222ENST00000555774 SLC25A36Q96CQ1 311 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 UPB1Q9UBR1 384 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 ZNF107Q9UII5 783 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-222ENST00000555774 PPIEQ9UNP9 301 aaKnown RBP12.15□□□□□ -0.46
SHMT2-222ENST00000555774 TRAV18A0A075B6X5 111 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 A0A1W2PPL8 197 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 MEGF11A6BM72 1044 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 A6NIZ1 184 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 MCRIP1C9JLW8 97 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 PLPP3O14495 311 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 FADS1O60427 444 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 CFDP00746 253 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-222ENST00000555774 GTF2F2P13984 249 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 IGFBP3P17936 291 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-222ENST00000555774 CXCL2P19875 107 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 RAP1BP61224 184 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 HNRNPKP61978 463 aaKnown RBP eCLIP12.15□□□□□ -0.46
SHMT2-222ENST00000555774 RAP1AP62834 184 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 ADAM8P78325 824 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 KCNAB1Q14722 419 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 AANATQ16613 207 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 POMZP3Q6PJE2 187 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 C3P1Q6ZMU1 363 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 KANSL1Q7Z3B3 1105 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 ADGRG3Q86Y34 549 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 LRRC20Q8TCA0 184 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 GPR119Q8TDV5 335 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 GPX8Q8TED1 209 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 SLCO5A1Q9H2Y9 848 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 ZNF304Q9HCX3 659 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 ING1Q9UK53 422 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-222ENST00000555774 EML5Q05BV3 1969 aa12.15□□□□□ -0.46
SHMT2-222ENST00000555774 TMEM272A0A1B0GTI8 110 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 B8ZZF3 427 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 WNT11O96014 354 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 ABCD3P28288 659 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 CAPZA1P52907 286 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 SLC26A5P58743 744 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 GLO1Q04760 184 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 EIF2B1Q14232 305 aaKnown RBP12.14□□□□□ -0.47
SHMT2-222ENST00000555774 CSRP2Q16527 193 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 ODF4Q2M2E3 257 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 NHLRC3Q5JS37 347 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 DNM1P34Q6PK57 102 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 SLC35D2Q76EJ3 337 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 NDUFAF7Q7L592 441 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 CLEC1AQ8NC01 280 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms