RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 OR6C68A6NDL8 312 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 CCDC182A6NF36 153 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 CENPBD1B2RD01 187 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 J3QRE1 110 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 XKRYO14609 159 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 FAM20BO75063 409 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 ZNF432O94892 652 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 IGHMP01871 453 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 CDK1P06493 297 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 CLUP10909 449 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 DBTP11182 482 aaKnown RBP9.61□□□□□ -0.87
SHMT2-218ENST00000555213 ATP6V1B1P15313 513 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 PSMB1P20618 241 aaKnown RBP9.61□□□□□ -0.87
SHMT2-218ENST00000555213 COX5AP20674 150 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 MPGP29372 298 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 KIR2DL3P43628 341 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 RPL27P61353 136 aaKnown RBP9.61□□□□□ -0.87
SHMT2-218ENST00000555213 EMX1Q04741 257 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-218ENST00000555213 FAM27E3Q08E93 113 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 CAMK2DQ13557 499 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 CRMP1Q14194 572 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 MELKQ14680 651 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 SFRP5Q5T4F7 317 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 TSPO2Q5TGU0 170 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 GPR139Q6DWJ6 353 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 PLBD1Q6P4A8 553 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 STAC2Q6ZMT1 411 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 BHLHA15Q7RTS1 189 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-218ENST00000555213 SSX8Q7RTT4 187 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 ZNF540Q8NDQ6 660 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 NOXO1Q8NFA2 376 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 OR52E2Q8NGJ4 325 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 OR4K13Q8NH42 304 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 IPCEF1Q8WWN9 437 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-218ENST00000555213 ASB10Q8WXI3 467 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 SLC25A44Q96H78 314 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-218ENST00000555213 TXNDC15Q96J42 360 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 Q96MT0 163 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 SLC38A2Q96QD8 506 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 SPOCK3Q9BQ16 436 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 ZNF649Q9BS31 505 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 MED18Q9BUE0 208 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 EMC6Q9BV81 110 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 ULBP2Q9BZM5 246 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 ACTR6Q9GZN1 396 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 FN3KQ9H479 309 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 SLC7A10Q9NS82 523 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 SCN3BQ9NY72 215 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 EXOGQ9Y2C4 368 aaKnown RBP9.61□□□□□ -0.87
SHMT2-218ENST00000555213 TPRKBQ9Y3C4 175 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 CACNA1CQ13936 2221 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 RELNP78509 3460 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 C19orf84I3L1E1 186 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 M0R3G1 203 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 PRODHO43272 600 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 MRPS14O60783 128 aaKnown RBP9.6□□□□□ -0.87
SHMT2-218ENST00000555213 RAD51DO75771 328 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 LYZL6O75951 148 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 CLPTM1O96005 669 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 MT-ND2P03891 347 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 PIPP12273 146 aaPredicted RBP9.6□□□□□ -0.87
SHMT2-218ENST00000555213 IGFBP2P18065 325 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 IGHV1-2P23083 117 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 EDNRAP25101 427 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 GRNP28799 593 aaKnown RBP9.6□□□□□ -0.87
SHMT2-218ENST00000555213 NTF4P34130 210 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 MAP2K4P45985 399 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 RPL5P46777 297 aaKnown RBP9.6□□□□□ -0.87
SHMT2-218ENST00000555213 ROR2Q01974 943 aaKnown RBP9.6□□□□□ -0.87
SHMT2-218ENST00000555213 ZNF91Q05481 1191 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 RUNX1T1Q06455 604 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.6□□□□□ -0.87
SHMT2-218ENST00000555213 ST3GAL4Q11206 333 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 MESTQ5EB52 335 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 ARMC4Q5T2S8 1044 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 FOXB2Q5VYV0 432 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 NXNL2Q5VZ03 156 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 OR7E24Q6IFN5 339 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 KLHL24Q6TFL4 600 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 B3GLCTQ6Y288 498 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 KCTD8Q6ZWB6 473 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 MEPCEQ7L2J0 689 aaKnown RBP9.6□□□□□ -0.87
SHMT2-218ENST00000555213 CXXC5Q7LFL8 322 aaKnown RBP9.6□□□□□ -0.87
SHMT2-218ENST00000555213 PRSS48Q7RTY5 328 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 ADCK1Q86TW2 530 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 DMRTC2Q8IXT2 367 aaPredicted RBP9.6□□□□□ -0.87
SHMT2-218ENST00000555213 C20orf196Q8IYI0 205 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 C17orf78Q8N4C9 275 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 CYB561A3Q8NBI2 242 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 C1orf162Q8NEQ5 155 aaPredicted RBP9.6□□□□□ -0.87
SHMT2-218ENST00000555213 ZNF519Q8TB69 540 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 FNDC8Q8TC99 324 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 FAM222BQ8WU58 562 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 RASD2Q96D21 266 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 LGALS12Q96DT0 336 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 NMNAT3Q96T66 252 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 TEAD3Q99594 435 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 ALG12Q9BV10 488 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 FGF20Q9NP95 211 aaPredicted RBP9.6□□□□□ -0.87
SHMT2-218ENST00000555213 CNOT2Q9NZN8 540 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms