RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 SAR1BQ9Y6B6 198 aa4.15□□□□□ -1.75
ATXN3-228ENST00000554592 A3GALT2U3KPV4 340 aa4.15□□□□□ -1.75
ATXN3-228ENST00000554592 LOC105371242A0A075B767 164 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 IGHV1-18A0A0C4DH31 117 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 TMEM129A0AVI4 362 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 SH3PXD2BA1X283 911 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 LYNX1G3V0Z9 82 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 J3QLI3 93 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 hCG_2039718K7EN88 272 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 KLF11O14901 512 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 AHCYL1O43865 530 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 EIF4E2O60573 245 aaKnown RBP4.14□□□□□ -1.75
ATXN3-228ENST00000554592 OR4F21O95013 312 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 NDUFB8O95169 186 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 H6PDO95479 791 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 RPS17P08708 135 aaKnown RBP4.14□□□□□ -1.75
ATXN3-228ENST00000554592 ADRA2AP08913 450 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 FGF2P09038 288 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 LYNX1P0DP58 116 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 SAGP10523 405 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-228ENST00000554592 TFPIP10646 304 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 CDH2P19022 906 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-228ENST00000554592 ATP6V1C1P21283 382 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 ACHEP22303 614 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 PRTN3P24158 256 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 COL8A2P25067 703 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 GCH1P30793 250 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 HSD17B3P37058 310 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 MAGEA8P43361 318 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 CLK1P49759 484 aaKnown RBP4.14□□□□□ -1.75
ATXN3-228ENST00000554592 ATP12AP54707 1039 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 CDH12P55289 794 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 SELENOVP59797 346 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 LMO4P61968 165 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 IL1RL1Q01638 556 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 NAAAQ02083 359 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 POU3F1Q03052 451 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-228ENST00000554592 NAB1Q13506 487 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 QPRTQ15274 297 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 RASA2Q15283 850 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 RBMS2Q15434 407 aaKnown RBP4.14□□□□□ -1.75
ATXN3-228ENST00000554592 DUSP5Q16690 384 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 TECRLQ5HYJ1 363 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 ZNF311Q5JNZ3 666 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 TSPO2Q5TGU0 170 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 C9orf135Q5VTT2 229 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 ACSM5Q6NUN0 579 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 C3orf33Q6P1S2 294 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 SPATA21Q7Z572 469 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 KLHL7Q8IXQ5 586 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 PARP16Q8N5Y8 322 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 NANOGP1Q8N7R0 232 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 COX18Q8N8Q8 333 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 TEX45Q8NA69 505 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 NUP37Q8NFH4 326 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 CLDND2Q8NHS1 167 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 TMEM234Q8WY98 164 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 ST8SIA1Q92185 356 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 RDH5Q92781 318 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 ZNF524Q96C55 264 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 GIMAP5Q96F15 307 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 C16orf58Q96GQ5 468 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 ARL5BQ96KC2 179 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 STACQ99469 402 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 SLC6A7Q99884 636 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 PKP2Q99959 881 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 FUT8Q9BYC5 575 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 PARD6BQ9BYG5 372 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 ACPTQ9BZG2 426 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 FAM107BQ9H098 131 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 DYNLRB1Q9NP97 96 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 SLC7A10Q9NS82 523 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 GIN1Q9NXP7 522 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 CRNNQ9UBG3 495 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-228ENST00000554592 RNF14Q9UBS8 474 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 ZNF225Q9UK10 706 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 SNX12Q9UMY4 172 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 TRAPPC4Q9Y296 219 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 SNX24Q9Y343 169 aa4.14□□□□□ -1.75
ATXN3-228ENST00000554592 SPIN1Q9Y657 262 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-228ENST00000554592 YLPM1P49750 1951 aaKnown RBP4.13□□□□□ -1.75
ATXN3-228ENST00000554592 TGP01266 2768 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 A0A0G2JMP0 313 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 A0A0X1KG70 313 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 GAGE12JA6NER3 117 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 ANKRD28O15084 1053 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 ZNF264O43296 627 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 PLPP2O43688 288 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 EIF1BO60739 113 aaKnown RBP4.13□□□□□ -1.75
ATXN3-228ENST00000554592 HNRNPCL1O60812 293 aaKnown RBP4.13□□□□□ -1.75
ATXN3-228ENST00000554592 RGS11O94810 467 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 OR2C1O95371 312 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 PMS2P2O95744 297 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 IGFBP1P08833 259 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-228ENST00000554592 HOXB5P09067 269 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 ACP2P11117 423 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 ETFAP13804 333 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 ADRA2CP18825 462 aa4.13□□□□□ -1.75
ATXN3-228ENST00000554592 TSPAN8P19075 237 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms