RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 DDAH2O95865 285 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 TTRP02766 147 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 PPP1CAP62136 330 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 PAFAH1B3Q15102 231 aaKnown RBP3.04□□□□□ -1.92
SYNE2-212ENST00000554584 IGFBP7Q16270 282 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 EXT1Q16394 746 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 THEM4Q5T1C6 240 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 PPP1R3BQ86XI6 285 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 TEPSINQ96N21 525 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 EGLN3Q9H6Z9 239 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 INPP5EQ9NRR6 644 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 SLC7A8Q9UHI5 535 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 CEPT1Q9Y6K0 416 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 ZNF264O43296 627 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 ANKRD34CP0C6C1 535 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 KRTDAPP60985 99 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 ST3GAL3Q11203 375 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 LRIF1Q5T3J3 769 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 DCAF4L2Q8NA75 395 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 MDGA1Q8NFP4 955 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 FUNDC2Q9BWH2 189 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 PRO1933Q9H354 126 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 MYOZ1Q9NP98 299 aaPredicted RBP3.04□□□□□ -1.92
SYNE2-212ENST00000554584 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.04□□□□□ -1.92
SYNE2-212ENST00000554584 PAK1IP1Q9NWT1 392 aaPredicted RBP3.04□□□□□ -1.92
SYNE2-212ENST00000554584 MARCH5Q9NX47 278 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 PI15O43692 258 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 COQ9O75208 318 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 NPPAP01160 153 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 SPP1P10451 314 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 MS4A13Q5J8X5 152 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 NANOGP8Q6NSW7 305 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 UGT2A3Q6UWM9 527 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 C1orf87Q8N0U7 546 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 OR13H1Q8NG92 308 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 OR52R1Q8NGF1 315 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 RPUSD4Q96CM3 377 aaKnown RBP3.04□□□□□ -1.92
SYNE2-212ENST00000554584 TMEM43Q9BTV4 400 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 APOOQ9BUR5 198 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 KCNK15Q9H427 330 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 CLEC1BQ9P126 229 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 CTSFQ9UBX1 484 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 MYOM1P52179 1685 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 A0A1W2PP18 115 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 SRFP11831 508 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 PPT1P50897 306 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 LYZP61626 148 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 CCL7P80098 99 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 CRMP1Q14194 572 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 ANXA2RQ3ZCQ2 193 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 TRMT12Q53H54 448 aaKnown RBP3.04□□□□□ -1.92
SYNE2-212ENST00000554584 OR2T5Q6IEZ7 315 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 OR2T29Q8NH02 315 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 WFDC5Q8TCV5 224 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 SLC35F5Q8WV83 523 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 MSI2Q96DH6 328 aaKnown RBP3.04□□□□□ -1.92
SYNE2-212ENST00000554584 MS4A4AQ96JQ5 239 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 UHRF2Q96PU4 802 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 ARV1Q9H2C2 271 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 DTLQ9NZJ0 730 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 SRPX2O60687 465 aaPredicted RBP3.04□□□□□ -1.92
SYNE2-212ENST00000554584 RHBDL1O75783 438 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 PF4P02776 101 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 CD9P21926 228 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 MFAP4P55083 255 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 SOX8P57073 446 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 PRSS36Q5K4E3 855 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 TMIGD1Q6UXZ0 262 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 OR5L2Q8NGL0 311 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 TBC1D20Q96BZ9 403 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 COQ10AQ96MF6 247 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 DNMT3BQ9UBC3 853 aaKnown RBP3.04□□□□□ -1.92
SYNE2-212ENST00000554584 DCTN6O00399 190 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 PPP1R2P9O14990 202 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 APEX1P27695 318 aaKnown RBP3.04□□□□□ -1.92
SYNE2-212ENST00000554584 COMPP49747 757 aaPredicted RBP3.04□□□□□ -1.92
SYNE2-212ENST00000554584 CLN3Q13286 438 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 GALEQ14376 348 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 HBMQ6B0K9 141 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 OR10Z1Q8NGY1 313 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 NANPQ8TBE9 248 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 PERPQ96FX8 193 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 PCYT2Q99447 389 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 SLC38A1Q9H2H9 487 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 IGHV3-66A0A0C4DH42 116 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 CER1O95813 267 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 HEXAP06865 529 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 CELA2AP08217 269 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 PRPS1P60891 318 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 ZNF260Q3ZCT1 412 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 ZNF626Q68DY1 528 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 IRF2BP2Q7Z5L9 587 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 SLC35A4Q96G79 324 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 POFUT1Q9H488 388 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 ADAMTS6Q9UKP5 1117 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 KNDC1Q76NI1 1749 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 OR5H8P0DN80 308 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 CCL2P13500 99 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 PORP16435 677 aaPredicted RBP3.04□□□□□ -1.92
SYNE2-212ENST00000554584 ADIPOQQ15848 244 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms