RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 CYB561A3Q8NBI2 242 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 OR2T33Q8NG76 320 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 LYPD6BQ8NI32 183 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 ADAMTS16Q8TE57 1224 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 SETD7Q8WTS6 366 aaKnown RBP3.57□□□□□ -1.84
SCFD1-211ENST00000554437 UFD1Q92890 307 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 FAM122AQ96E09 287 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 CPB2Q96IY4 423 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 ZNF670Q9BS34 389 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 SPZ1Q9BXG8 430 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 ACTR3CQ9C0K3 210 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-211ENST00000554437 KIR3DX1Q9H7L2 352 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 ANKHQ9HCJ1 492 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 CD209Q9NNX6 404 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 VCX3AQ9NNX9 186 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 OR2S2Q9NQN1 319 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 PLSCR3Q9NRY6 295 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 SLC17A7Q9P2U7 560 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 HMGXB4Q9UGU5 601 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 SLC17A4Q9Y2C5 497 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 KCNIP3Q9Y2W7 256 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 PUS1Q9Y606 427 aaKnown RBP eCLIP3.57□□□□□ -1.84
SCFD1-211ENST00000554437 CDH10Q9Y6N8 788 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 TNRQ92752 1358 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-211ENST00000554437 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-211ENST00000554437 MGAT4DA6NG13 374 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 RNASEK-C17orf49H0YIS7 233 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 PPP1R2P9O14990 202 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 XRCC2O43543 280 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 PRKYO43930 277 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 FADS2O95864 444 aaKnown RBP3.56□□□□□ -1.84
SCFD1-211ENST00000554437 KRT16P08779 473 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 CD1EP15812 388 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 NPR2P20594 1047 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 SERPINA2P20848 420 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 BGNP21810 368 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 DRD3P35462 400 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 PCK1P35558 622 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 CSKP41240 450 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 TNFSF9P41273 254 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 PRKXP51817 358 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 KPNA2P52292 529 aaKnown RBP3.56□□□□□ -1.84
SCFD1-211ENST00000554437 UBE2MP61081 183 aaKnown RBP3.56□□□□□ -1.84
SCFD1-211ENST00000554437 ADARB1P78563 741 aaKnown RBP3.56□□□□□ -1.84
SCFD1-211ENST00000554437 ST3GAL3Q11203 375 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 OR5I1Q13606 314 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 ZNF691Q5VV52 312 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 PVRIGQ6DKI7 326 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 ZNF544Q6NX49 715 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 C1orf94Q6P1W5 598 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 PRMT9Q6P2P2 845 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 MBOAT1Q6ZNC8 495 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 ZNF621Q6ZSS3 439 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 PGAP1Q75T13 922 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 KRTAP11-1Q8IUC1 163 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 CMTM1Q8IZ96 169 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 OR56A4Q8NGH8 313 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 ZNF564Q8TBZ8 553 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-211ENST00000554437 TMEM239Q8WW34 195 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 TRUB1Q8WWH5 349 aaKnown RBP3.56□□□□□ -1.84
SCFD1-211ENST00000554437 SLC25A38Q96DW6 304 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 CTRCQ99895 268 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 C19orf24Q9BVV8 132 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 ZYG11BQ9C0D3 744 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 DRC3Q9H069 523 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 NAT10Q9H0A0 1025 aaKnown RBP3.56□□□□□ -1.84
SCFD1-211ENST00000554437 RBKSQ9H477 322 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 SAV1Q9H4B6 383 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-211ENST00000554437 NTN4Q9HB63 628 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 FGF20Q9NP95 211 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-211ENST00000554437 SAMSN1Q9NSI8 373 aaKnown RBP3.56□□□□□ -1.84
SCFD1-211ENST00000554437 ANAPC11Q9NYG5 84 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 EHFQ9NZC4 300 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 NYAP2Q9P242 653 aa3.56□□□□□ -1.84
SCFD1-211ENST00000554437 WRAP73Q9P2S5 460 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-211ENST00000554437 MRM2Q9UI43 246 aaKnown RBP3.56□□□□□ -1.84
SCFD1-211ENST00000554437 LSM7Q9UK45 103 aaKnown RBP3.56□□□□□ -1.84
SCFD1-211ENST00000554437 AQRO60306 1485 aaKnown RBP eCLIP3.55□□□□□ -1.842e-9■■■■■ 39.4
SCFD1-211ENST00000554437 UBN2Q6ZU65 1347 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 A0A1W2PRF3 423 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 A0A1W2PRM7 423 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 OR5B21A6NL26 309 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 PP2D1A8MPX8 630 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 E7ESA3 106 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 DYNC1I1O14576 645 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 SOX15O60248 233 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 EIF4E2O60573 245 aaKnown RBP3.55□□□□□ -1.84
SCFD1-211ENST00000554437 SERF1AO75920 110 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 ATP5HO75947 161 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 AHSA1O95433 338 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 LGALS2P05162 132 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 OCMP0CE72 109 aaPredicted RBP3.55□□□□□ -1.84
SCFD1-211ENST00000554437 MGMTP16455 207 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 ZP3P21754 424 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 HTR2CP28335 458 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 IL12AP29459 219 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 HOXA6P31267 233 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 UGT1A3P35503 534 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 LEPP41159 167 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms