RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 DEFB107AQ8IZN7 70 aa6.5□□□□□ -1.37
LINC00640-201ENST00000554409 ARHGAP24Q8N264 748 aa6.5□□□□□ -1.37
LINC00640-201ENST00000554409 FITM2Q8N6M3 262 aa6.5□□□□□ -1.37
LINC00640-201ENST00000554409 SYT14Q8NB59 555 aa6.5□□□□□ -1.37
LINC00640-201ENST00000554409 OR4K5Q8NGD3 323 aa6.5□□□□□ -1.37
LINC00640-201ENST00000554409 OR13C2Q8NGS9 318 aa6.5□□□□□ -1.37
LINC00640-201ENST00000554409 OR51A7Q8NH64 312 aa6.5□□□□□ -1.37
LINC00640-201ENST00000554409 FGFBP3Q8TAT2 258 aa6.5□□□□□ -1.37
LINC00640-201ENST00000554409 NABP1Q96AH0 204 aa6.5□□□□□ -1.37
LINC00640-201ENST00000554409 PYURFQ96I23 114 aa6.5□□□□□ -1.37
LINC00640-201ENST00000554409 SORCS2Q96PQ0 1159 aa6.5□□□□□ -1.37
LINC00640-201ENST00000554409 TSPAN32Q96QS1 320 aa6.5□□□□□ -1.37
LINC00640-201ENST00000554409 TNFRSF13CQ96RJ3 184 aa6.5□□□□□ -1.37
LINC00640-201ENST00000554409 GPX7Q96SL4 187 aaPredicted RBP6.5□□□□□ -1.37
LINC00640-201ENST00000554409 CDRT15Q96T59 188 aa6.5□□□□□ -1.37
LINC00640-201ENST00000554409 SH3GL3Q99963 347 aa6.5□□□□□ -1.37
LINC00640-201ENST00000554409 RHNO1Q9BSD3 238 aa6.5□□□□□ -1.37
LINC00640-201ENST00000554409 FUZQ9BT04 418 aa6.5□□□□□ -1.37
LINC00640-201ENST00000554409 REG4Q9BYZ8 158 aa6.5□□□□□ -1.37
LINC00640-201ENST00000554409 NDEL1Q9GZM8 345 aa6.5□□□□□ -1.37
LINC00640-201ENST00000554409 SIAEQ9HAT2 523 aa6.5□□□□□ -1.37
LINC00640-201ENST00000554409 MYOZ1Q9NP98 299 aaPredicted RBP6.5□□□□□ -1.37
LINC00640-201ENST00000554409 KRCC1Q9NPI7 259 aaPredicted RBP6.5□□□□□ -1.37
LINC00640-201ENST00000554409 FAM53CQ9NYF3 392 aa6.5□□□□□ -1.37
LINC00640-201ENST00000554409 SLC7A8Q9UHI5 535 aa6.5□□□□□ -1.37
LINC00640-201ENST00000554409 ZNF346Q9UL40 294 aaKnown RBP6.5□□□□□ -1.37
LINC00640-201ENST00000554409 SIGLEC7Q9Y286 467 aa6.5□□□□□ -1.37
LINC00640-201ENST00000554409 SPEF1Q9Y4P9 236 aa6.5□□□□□ -1.37
LINC00640-201ENST00000554409 FKBP7Q9Y680 259 aa6.5□□□□□ -1.37
LINC00640-201ENST00000554409 CHD3Q12873 2000 aaKnown RBP6.5□□□□□ -1.37
LINC00640-201ENST00000554409 C2CD3Q4AC94 2353 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 IGHV4-30-2A0A087WSY4 118 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 IGKV1D-43A0A0B4J1Z2 117 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 TMEM129A0AVI4 362 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 SLC22A23A1A5C7 686 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 SH3PXD2BA1X283 911 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 hCG_2039718K7EN88 272 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 AHCYL1O43865 530 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 PTP4A3O75365 173 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 NDUFB2O95178 105 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 SNAP29O95721 258 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 FABP3P05413 133 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 MMP7P09237 267 aaPredicted RBP6.49□□□□□ -1.37
LINC00640-201ENST00000554409 PATE4P0C8F1 98 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 SLC25A16P16260 332 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 ZNF26P17031 533 aaPredicted RBP6.49□□□□□ -1.37
LINC00640-201ENST00000554409 GLRXP35754 106 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 MXRA7P84157 204 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 GALK2Q01415 458 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 FMODQ06828 376 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 KRTAP1-1Q07627 177 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 CD47Q08722 323 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 TOP3AQ13472 1001 aaPredicted RBP6.49□□□□□ -1.37
LINC00640-201ENST00000554409 SEC23BQ15437 767 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 MTX3Q5HYI7 312 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 FGD3Q5JSP0 725 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 FAM27BQ5VT28 67 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 VHLLQ6RSH7 139 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 SLC16A14Q7RTX9 510 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 FAM122BQ7Z309 247 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 IGFN1Q86VF2 1251 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 MEX3DQ86XN8 651 aaKnown RBP6.49□□□□□ -1.37
LINC00640-201ENST00000554409 ZNF525Q8N782 197 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 ARIH2OSQ8N7S6 290 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 CCDC197Q8NCU1 140 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 SLC30A7Q8NEW0 376 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 C10orf105Q8TEF2 133 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 HTRA1Q92743 480 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 MRPL24Q96A35 216 aaKnown RBP6.49□□□□□ -1.37
LINC00640-201ENST00000554409 FAM46AQ96IP4 442 aaKnown RBP6.49□□□□□ -1.37
LINC00640-201ENST00000554409 NSMCE2Q96MF7 247 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 RBP7Q96R05 134 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 DOK1Q99704 481 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 KCNN2Q9H2S1 579 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 MUC13Q9H3R2 512 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 ACTR3BQ9P1U1 418 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 CMAHPQ9Y471 501 aa6.49□□□□□ -1.37
LINC00640-201ENST00000554409 VPS13CQ709C8 3753 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 MTORP42345 2549 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 YLPM1P49750 1951 aaKnown RBP6.48□□□□□ -1.37
LINC00640-201ENST00000554409 MAP1AP78559 2803 aaPredicted RBP6.48□□□□□ -1.37
LINC00640-201ENST00000554409 TRBV4-1A0A0J9YWV2 114 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 IQCMA0A1B0GVH7 501 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 B2RBV5 119 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 VWC2LB2RUY7 222 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 NDUFS8O00217 210 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 GPRIN2O60269 458 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 DIRAS1O95057 198 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 GADD45GO95257 159 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 CD14P08571 375 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 CST2P09228 141 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 CALB2P22676 271 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 PCSK6P29122 969 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 SDHAP31040 664 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 CDAP32320 146 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 MSX2P35548 267 aaPredicted RBP6.48□□□□□ -1.37
LINC00640-201ENST00000554409 RPL4P36578 427 aaKnown RBP6.48□□□□□ -1.37
LINC00640-201ENST00000554409 PDLIM4P50479 330 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 FXYD6P3P58550 94 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 ERVK-25P63136 954 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms