RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 DDOSTP39656 456 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 VHLP40337 213 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 STX17P56962 302 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 FBXW4P57775 412 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 OR2B6P58173 313 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 MLF1P58340 268 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 STXBP1P61764 594 aaKnown RBP1.77□□□□□ -2.13
SRP54-204ENST00000553923 PAFAH1B2P68402 229 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 PAX2Q02962 417 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 TLE4Q04727 773 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 CHRNB3Q05901 458 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 PDIA2Q13087 525 aaKnown RBP1.77□□□□□ -2.13
SRP54-204ENST00000553923 SERTAD2Q14140 314 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 LY6DQ14210 128 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 ARL6IP1Q15041 203 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 ZNF146Q15072 292 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 SIX1Q15475 284 aaPredicted RBP1.77□□□□□ -2.13
SRP54-204ENST00000553923 TNXAQ16473 311 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 KCTD19Q17RG1 926 aaPredicted RBP1.77□□□□□ -2.13
SRP54-204ENST00000553923 NSUN5P1Q3KNT7 163 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 HIGD2BQ4VC39 106 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 PAN3Q58A45 887 aaKnown RBP1.77□□□□□ -2.13
SRP54-204ENST00000553923 TPRG1LQ5T0D9 272 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 LINC00242Q5T6M2 205 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 GPRC6AQ5T6X5 926 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 ZNF691Q5VV52 312 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 TIGD3Q6B0B8 471 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 PRMT9Q6P2P2 845 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 RFWD3Q6PCD5 774 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 CNIH2Q6PI25 160 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 C3P1Q6ZMU1 363 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 GDPGP1Q6ZNW5 385 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 ACOT7LQ6ZUV0 252 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 ARCQ7LC44 396 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 TIPARPQ7Z3E1 657 aaKnown RBP1.77□□□□□ -2.13
SRP54-204ENST00000553923 UNC93AQ86WB7 457 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 CARM1Q86X55 608 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 APRG1Q8IVJ8 170 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 BOD1L2Q8IYS8 172 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 SLC22A18ASQ8N1D0 253 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 SYS1Q8N2H4 156 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 C17orf78Q8N4C9 275 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 ZNF565Q8N9K5 539 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 SNX31Q8N9S9 440 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 CYB561A3Q8NBI2 242 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 OR4Q3Q8NH05 313 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.77□□□□□ -2.13
SRP54-204ENST00000553923 TMEM239Q8WW34 195 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 BAALCQ8WXS3 180 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 SMARCD2Q92925 531 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 TNFRSF14Q92956 283 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 LRRC45Q96CN5 670 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 PAGE5Q96GU1 130 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 CPB2Q96IY4 423 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 C8orf76Q96K31 380 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 ZNF514Q96K75 400 aaPredicted RBP1.77□□□□□ -2.13
SRP54-204ENST00000553923 B3GALT6Q96L58 329 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 PGLYRP4Q96LB8 373 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 NOL4LQ96MY1 436 aaPredicted RBP1.77□□□□□ -2.13
SRP54-204ENST00000553923 SCGB3A2Q96PL1 93 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 LGMNQ99538 433 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 RBBP8Q99708 897 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 CTRCQ99895 268 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 UQCC2Q9BRT2 126 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 MAP1LC3CQ9BXW4 147 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 NEUROG2Q9H2A3 272 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 OR52A5Q9H2C5 316 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 C1orf198Q9H425 327 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 CWH43Q9H720 699 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 KIR3DX1Q9H7L2 352 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 UBE2ZQ9H832 354 aaPredicted RBP1.77□□□□□ -2.13
SRP54-204ENST00000553923 SIAEQ9HAT2 523 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 MRM3Q9HC36 420 aaKnown RBP1.77□□□□□ -2.13
SRP54-204ENST00000553923 KCNJ16Q9NPI9 418 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 OR2S2Q9NQN1 319 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 SIRT7Q9NRC8 400 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 ZNF446Q9NWS9 450 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 NDE1Q9NXR1 346 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 STMN3Q9NZ72 180 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 TREM2Q9NZC2 230 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 MLXQ9UH92 298 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 MRM2Q9UI43 246 aaKnown RBP1.77□□□□□ -2.13
SRP54-204ENST00000553923 GNPTGQ9UJJ9 305 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 NXT1Q9UKK6 140 aaKnown RBP1.77□□□□□ -2.13
SRP54-204ENST00000553923 PSMD13Q9UNM6 376 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 SAMD4AQ9UPU9 718 aaKnown RBP1.77□□□□□ -2.13
SRP54-204ENST00000553923 RCL1Q9Y2P8 373 aaKnown RBP1.77□□□□□ -2.13
SRP54-204ENST00000553923 L3MBTL1Q9Y468 752 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 CDH10Q9Y6N8 788 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 HCFC1P51610 2035 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 SBNO1A3KN83 1393 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 ARID2Q68CP9 1835 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 ZNF816-ZNF321PA0A0X1KG74 233 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 A0A1B0GWB2 263 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 SLC22A20A6NK97 555 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 LYRM9A8MSI8 78 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 ZNF705EA8MWA4 302 aaPredicted RBP1.76□□□□□ -2.13
SRP54-204ENST00000553923 ZNF487B1APH4 448 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 B4DXG7 233 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 E7EWF7 191 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms