RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 MED19A0JLT2 244 aaPredicted RBP4.45□□□□□ -1.7
VTI1B-202ENST00000553619 PRSS37A4D1T9 235 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF724A8MTY0 619 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 KDM4EB2RXH2 506 aaPredicted RBP4.45□□□□□ -1.7
VTI1B-202ENST00000553619 B4DXG7 233 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 SLC1A7O00341 560 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 PHYHO14832 338 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 TPD52L2O43399 206 aaKnown RBP4.45□□□□□ -1.7
VTI1B-202ENST00000553619 RGS10O43665 173 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 PRKYO43930 277 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 CDC14BO60729 498 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 CYTIPO60759 359 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 ENTPD6O75354 484 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 SLC43A1O75387 559 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 KHDRBS3O75525 346 aaKnown RBP4.45□□□□□ -1.7
VTI1B-202ENST00000553619 TRMUO75648 421 aaKnown RBP4.45□□□□□ -1.7
VTI1B-202ENST00000553619 SERPINI2O75830 405 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 GLCEO94923 617 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 CLPTM1O96005 669 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 IGHG1P01857 330 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 PIPP12273 146 aaPredicted RBP4.45□□□□□ -1.7
VTI1B-202ENST00000553619 GABRB1P18505 474 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 CRHBPP24387 322 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 HTR1FP30939 366 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 FMO3P31513 532 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 TTKP33981 857 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 PTGS2P35354 604 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 CAPZA2P47755 286 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 MTNR1AP48039 350 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 SUCLG1P53597 346 aaKnown RBP4.45□□□□□ -1.7
VTI1B-202ENST00000553619 SLC16A1P53985 500 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 CDH11P55287 796 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 BIDP55957 195 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 CLDN17P56750 224 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 CLDN18P56856 261 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 CLDN20P56880 219 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 CLRN1P58418 232 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 FXYD6P3P58550 94 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 POU3F1Q03052 451 aaPredicted RBP4.45□□□□□ -1.7
VTI1B-202ENST00000553619 KRR1Q13601 381 aaKnown RBP4.45□□□□□ -1.7
VTI1B-202ENST00000553619 FHL1Q13642 323 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 SLC17A1Q14916 467 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 EIF2S3LQ2VIR3 472 aaKnown RBP4.45□□□□□ -1.7
VTI1B-202ENST00000553619 CTU2Q2VPK5 515 aaKnown RBP4.45□□□□□ -1.7
VTI1B-202ENST00000553619 LINC00303Q3SY05 128 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 KLHL12Q53G59 568 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 AADACL4Q5VUY2 407 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 OR2A2Q6IF42 318 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 PLBD1Q6P4A8 553 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 Q6ZPB1 254 aaPredicted RBP4.45□□□□□ -1.7
VTI1B-202ENST00000553619 CREB3L2Q70SY1 520 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 SHFQ7M4L6 423 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 PRSS48Q7RTY5 328 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 FAM122BQ7Z309 247 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 ABHD12BQ7Z5M8 362 aaPredicted RBP4.45□□□□□ -1.7
VTI1B-202ENST00000553619 IQCF1Q8N6M8 205 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 NPEPL1Q8NDH3 523 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 CNIH3Q8TBE1 160 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 Q8TCH9 128 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 FAR1Q8WVX9 515 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 FCGR1BQ92637 280 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 GGHQ92820 318 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 PTP4A1Q93096 173 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 DNAJA3Q96EY1 480 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 NEIL1Q96FI4 390 aaPredicted RBP4.45□□□□□ -1.7
VTI1B-202ENST00000553619 SLC25A44Q96H78 314 aaPredicted RBP4.45□□□□□ -1.7
VTI1B-202ENST00000553619 WDYHV1Q96HA8 205 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 TMEM80Q96HE8 168 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 Q96M85 177 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF582Q96NG8 517 aaPredicted RBP4.45□□□□□ -1.7
VTI1B-202ENST00000553619 NMNAT3Q96T66 252 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 COPS4Q9BT78 406 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 CCDC90BQ9GZT6 254 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 ENKD1Q9H0I2 346 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 OR51V1Q9H2C8 321 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 KCNN2Q9H2S1 579 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 DUSP21Q9H596 190 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 CALHM2Q9HA72 323 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 MSL2Q9HCI7 577 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF71Q9NQZ8 489 aaPredicted RBP4.45□□□□□ -1.7
VTI1B-202ENST00000553619 BATF3Q9NR55 127 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 INPP5EQ9NRR6 644 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 MRPS18AQ9NVS2 196 aaKnown RBP4.45□□□□□ -1.7
VTI1B-202ENST00000553619 ASB6Q9NWX5 421 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 GALNT8Q9NY28 637 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 VSX1Q9NZR4 365 aaPredicted RBP4.45□□□□□ -1.7
VTI1B-202ENST00000553619 NDUFA13Q9P0J0 144 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 PSORS1C1Q9UIG5 152 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 RCE1Q9Y256 329 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 ERGIC3Q9Y282 383 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 EXOGQ9Y2C4 368 aaKnown RBP4.45□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF175Q9Y473 711 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 TMEM14AQ9Y6G1 99 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF292O60281 2723 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 KIAA1549Q9HCM3 1950 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF407Q9C0G0 2248 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 IGKV3D-15A0A087WSY6 115 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 A0A1B0GTH9 108 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 SLC22A23A1A5C7 686 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 SLC22A20A6NK97 555 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms