RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 C6orf203Q9P0P8 240 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-222ENST00000553570 ICAM5Q9UMF0 924 aa4.15□□□□□ -1.75
ATXN3-222ENST00000553570 ANGPT4Q9Y264 503 aa4.15□□□□□ -1.75
ATXN3-222ENST00000553570 ZNF443Q9Y2A4 671 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-222ENST00000553570 IFT52Q9Y366 437 aa4.15□□□□□ -1.75
ATXN3-222ENST00000553570 TMED7Q9Y3B3 224 aa4.15□□□□□ -1.75
ATXN3-222ENST00000553570 A3GALT2U3KPV4 340 aa4.15□□□□□ -1.75
ATXN3-222ENST00000553570 UBR5O95071 2799 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-222ENST00000553570 IGLV3-32A0A0A0MS00 114 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 CLEC18AA5D8T8 446 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 CD8B2A6NJW9 211 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 CCT8L1PA6NM43 557 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 NPIPB9F8W1W9 429 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 CASKO14936 926 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 AHCYL1O43865 530 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 KIAA0513O60268 411 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 TPST1O60507 370 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 TPST2O60704 377 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 SHOX2O60902 331 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-222ENST00000553570 BCAS1O75363 584 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-222ENST00000553570 AQP8O94778 261 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 NDUFB8O95169 186 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 RCBTB2O95199 551 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 NTN1O95631 604 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 FGF2P09038 288 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 PABPC4LP0CB38 370 aaKnown RBP4.14□□□□□ -1.75
ATXN3-222ENST00000553570 PRG2P13727 222 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 PRF1P14222 555 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 GPX2P18283 190 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 CDH2P19022 906 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-222ENST00000553570 AGAP20933 346 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 PTNP21246 168 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 SHC1P29353 583 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 TIMP3P35625 211 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 APOBEC1P41238 236 aaKnown RBP4.14□□□□□ -1.75
ATXN3-222ENST00000553570 NUDT2P50583 147 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 POLR2HP52434 150 aaKnown RBP4.14□□□□□ -1.75
ATXN3-222ENST00000553570 ZNF136P52737 540 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 CDH12P55289 794 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 RGS8P57771 180 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-222ENST00000553570 SELENOVP59797 346 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 EEF1A1P68104 462 aaKnown RBP4.14□□□□□ -1.75
ATXN3-222ENST00000553570 RASGEF1BQ0VAM2 473 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 SKP2Q13309 424 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 RBMS2Q15434 407 aaKnown RBP4.14□□□□□ -1.75
ATXN3-222ENST00000553570 Q5PR19 223 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 LRIF1Q5T3J3 769 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 HIST2H2BDQ6DRA6 164 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 TMEM225Q6GV28 225 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 OR2A2Q6IF42 318 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 CLEC18BQ6UXF7 455 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 PLEKHM3Q6ZWE6 761 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 FCRLAQ7L513 359 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 MSRB3Q8IXL7 192 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 ZNF440Q8IYI8 595 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 ZNF100Q8IYN0 542 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 UBE2J2Q8N2K1 259 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 C10orf111Q8N326 155 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 GTPBP8Q8N3Z3 284 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-222ENST00000553570 PARP16Q8N5Y8 322 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 NANOGP1Q8N7R0 232 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 TEX45Q8NA69 505 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 CLEC18CQ8NCF0 446 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 LINC01560Q8TB33 94 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 ST8SIA1Q92185 356 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 DDIT4LQ96D03 193 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 CMTM5Q96DZ9 223 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 ZHX1-C8orf76Q96EF9 292 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 CCT8L2Q96SF2 557 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 ZNF559Q9BR84 538 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 NAA11Q9BSU3 229 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-222ENST00000553570 RBM24Q9BX46 236 aaKnown RBP4.14□□□□□ -1.75
ATXN3-222ENST00000553570 TAPBPLQ9BX59 468 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 OR11A1Q9GZK7 315 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 OPN3Q9H1Y3 402 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-222ENST00000553570 IKZF5Q9H5V7 419 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 TMEM27Q9HBJ8 222 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 A4GALTQ9NPC4 353 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 SLC52A3Q9NQ40 469 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 ACER3Q9NUN7 267 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 ADPRHL2Q9NX46 363 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 PROCRQ9UNN8 238 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 ARL2BPQ9Y2Y0 163 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 SH3GLB1Q9Y371 365 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 SPIN1Q9Y657 262 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-222ENST00000553570 PTPN13Q12923 2485 aa4.14□□□□□ -1.75
ATXN3-222ENST00000553570 USP9XQ93008 2570 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-222ENST00000553570 CHD3Q12873 2000 aaKnown RBP4.13□□□□□ -1.75
ATXN3-222ENST00000553570 TMEM72A0PK05 275 aa4.13□□□□□ -1.75
ATXN3-222ENST00000553570 GAGE12JA6NER3 117 aa4.13□□□□□ -1.75
ATXN3-222ENST00000553570 PRORSD1PA6NEY8 169 aa4.13□□□□□ -1.75
ATXN3-222ENST00000553570 TUBAL3A6NHL2 446 aa4.13□□□□□ -1.75
ATXN3-222ENST00000553570 CPSF4LA6NMK7 179 aaKnown RBP4.13□□□□□ -1.75
ATXN3-222ENST00000553570 BBIP1A8MTZ0 92 aa4.13□□□□□ -1.75
ATXN3-222ENST00000553570 SNX3O60493 162 aa4.13□□□□□ -1.75
ATXN3-222ENST00000553570 DCTN3O75935 186 aa4.13□□□□□ -1.75
ATXN3-222ENST00000553570 KRT33AO76009 404 aa4.13□□□□□ -1.75
ATXN3-222ENST00000553570 RGS11O94810 467 aa4.13□□□□□ -1.75
ATXN3-222ENST00000553570 OR2C1O95371 312 aa4.13□□□□□ -1.75
ATXN3-222ENST00000553570 ZNF682O95780 498 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms