RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 CYP2R1Q6VVX0 501 aa16.62■□□□□ 0.25
PTCH1-227ENST00000553256 CDK20Q8IZL9 346 aa16.62■□□□□ 0.25
PTCH1-227ENST00000553256 CPEB3Q8NE35 698 aaKnown RBP16.62■□□□□ 0.25
PTCH1-227ENST00000553256 FNDC8Q8TC99 324 aa16.62■□□□□ 0.25
PTCH1-227ENST00000553256 RSRC1Q96IZ7 334 aaKnown RBP16.62■□□□□ 0.25
PTCH1-227ENST00000553256 SORCS2Q96PQ0 1159 aa16.62■□□□□ 0.25
PTCH1-227ENST00000553256 MUC13Q9H3R2 512 aa16.62■□□□□ 0.25
PTCH1-227ENST00000553256 PRPF19Q9UMS4 504 aaKnown RBP16.62■□□□□ 0.25
PTCH1-227ENST00000553256 IGHV4-30-2A0A087WSY4 118 aa16.61■□□□□ 0.25
PTCH1-227ENST00000553256 A6NIZ1 184 aa16.61■□□□□ 0.25
PTCH1-227ENST00000553256 AHCYL1O43865 530 aa16.61■□□□□ 0.25
PTCH1-227ENST00000553256 NDUFB2O95178 105 aa16.61■□□□□ 0.25
PTCH1-227ENST00000553256 GADD45GO95257 159 aa16.61■□□□□ 0.25
PTCH1-227ENST00000553256 SNAP29O95721 258 aa16.61■□□□□ 0.25
PTCH1-227ENST00000553256 RAB36O95755 333 aa16.61■□□□□ 0.25
PTCH1-227ENST00000553256 F12P00748 615 aaPredicted RBP16.61■□□□□ 0.25
PTCH1-227ENST00000553256 HEXAP06865 529 aa16.61■□□□□ 0.25
PTCH1-227ENST00000553256 NPR2P20594 1047 aa16.61■□□□□ 0.25
PTCH1-227ENST00000553256 FPR3P25089 353 aa16.61■□□□□ 0.25
PTCH1-227ENST00000553256 RRM2P31350 389 aa16.61■□□□□ 0.25
PTCH1-227ENST00000553256 GLRXP35754 106 aa16.61■□□□□ 0.25
PTCH1-227ENST00000553256 EFNA4P52798 201 aa16.61■□□□□ 0.25
PTCH1-227ENST00000553256 RAP1BP61224 184 aa16.61■□□□□ 0.25
PTCH1-227ENST00000553256 RAP1AP62834 184 aa16.61■□□□□ 0.25
PTCH1-227ENST00000553256 MXRA7P84157 204 aa16.61■□□□□ 0.25
PTCH1-227ENST00000553256 CHRNB3Q05901 458 aa16.61■□□□□ 0.25
PTCH1-227ENST00000553256 SNTB2Q13425 540 aaKnown RBP16.61■□□□□ 0.25
PTCH1-227ENST00000553256 DAG1Q14118 895 aa16.61■□□□□ 0.25
PTCH1-227ENST00000553256 MTX3Q5HYI7 312 aa16.61■□□□□ 0.25
PTCH1-227ENST00000553256 KRT80Q6KB66 452 aa16.61■□□□□ 0.25
PTCH1-227ENST00000553256 C1orf94Q6P1W5 598 aa16.61■□□□□ 0.25
PTCH1-227ENST00000553256 SLC16A14Q7RTX9 510 aa16.61■□□□□ 0.25
PTCH1-227ENST00000553256 TRPM8Q7Z2W7 1104 aa16.61■□□□□ 0.25
PTCH1-227ENST00000553256 ZDHHC21Q8IVQ6 265 aa16.61■□□□□ 0.25
PTCH1-227ENST00000553256 SLC7A6OSQ96CW6 309 aaPredicted RBP16.61■□□□□ 0.25
PTCH1-227ENST00000553256 CLPTM1LQ96KA5 538 aa16.61■□□□□ 0.25
PTCH1-227ENST00000553256 KCNS3Q9BQ31 491 aa16.61■□□□□ 0.25
PTCH1-227ENST00000553256 VSX1Q9NZR4 365 aaPredicted RBP16.61■□□□□ 0.25
PTCH1-227ENST00000553256 LYVE1Q9Y5Y7 322 aa16.61■□□□□ 0.25
PTCH1-227ENST00000553256 CR1P17927 2039 aa16.6■□□□□ 0.25
PTCH1-227ENST00000553256 PRSS37A4D1T9 235 aa16.6■□□□□ 0.25
PTCH1-227ENST00000553256 H7C1C5 153 aa16.6■□□□□ 0.25
PTCH1-227ENST00000553256 SSX4O60224 188 aa16.6■□□□□ 0.25
PTCH1-227ENST00000553256 ENTPD5O75356 428 aa16.6■□□□□ 0.25
PTCH1-227ENST00000553256 LY6HO94772 140 aa16.6■□□□□ 0.25
PTCH1-227ENST00000553256 FARS2O95363 451 aaKnown RBP16.6■□□□□ 0.25
PTCH1-227ENST00000553256 APEHP13798 732 aaKnown RBP16.6■□□□□ 0.25
PTCH1-227ENST00000553256 EVX1P49640 407 aa16.6■□□□□ 0.25
PTCH1-227ENST00000553256 PPOXP50336 477 aa16.6■□□□□ 0.25
PTCH1-227ENST00000553256 SMIM11AP58511 58 aa16.6■□□□□ 0.25
PTCH1-227ENST00000553256 LCN6P62502 163 aa16.6■□□□□ 0.25
PTCH1-227ENST00000553256 SPIBQ01892 262 aa16.6■□□□□ 0.25
PTCH1-227ENST00000553256 CD47Q08722 323 aa16.6■□□□□ 0.25
PTCH1-227ENST00000553256 ENDOGQ14249 297 aaKnown RBP16.6■□□□□ 0.25
PTCH1-227ENST00000553256 PGBD2Q6P3X8 592 aa16.6■□□□□ 0.25
PTCH1-227ENST00000553256 VHLLQ6RSH7 139 aa16.6■□□□□ 0.25
PTCH1-227ENST00000553256 PTCHD4Q6ZW05 846 aa16.6■□□□□ 0.25
PTCH1-227ENST00000553256 BCAS4Q8TDM0 211 aa16.6■□□□□ 0.25
PTCH1-227ENST00000553256 NSMAFQ92636 917 aa16.6■□□□□ 0.25
PTCH1-227ENST00000553256 MRPL24Q96A35 216 aaKnown RBP16.6■□□□□ 0.25
PTCH1-227ENST00000553256 RBP7Q96R05 134 aa16.6■□□□□ 0.25
PTCH1-227ENST00000553256 REG4Q9BYZ8 158 aa16.6■□□□□ 0.25
PTCH1-227ENST00000553256 MRPL37Q9BZE1 423 aaKnown RBP16.6■□□□□ 0.25
PTCH1-227ENST00000553256 MAGIXQ9H6Y5 334 aa16.6■□□□□ 0.25
PTCH1-227ENST00000553256 VNN3Q9NY84 501 aa16.6■□□□□ 0.25
PTCH1-227ENST00000553256 SVEP1Q4LDE5 3571 aa16.59■□□□□ 0.25
PTCH1-227ENST00000553256 TEX13CA0A0J9YWL9 993 aa16.59■□□□□ 0.25
PTCH1-227ENST00000553256 UNC119BA6NIH7 251 aa16.59■□□□□ 0.25
PTCH1-227ENST00000553256 RNF223E7ERA6 249 aa16.59■□□□□ 0.25
PTCH1-227ENST00000553256 ICMTO60725 284 aa16.59■□□□□ 0.25
PTCH1-227ENST00000553256 UBOX5O94941 541 aa16.59■□□□□ 0.25
PTCH1-227ENST00000553256 CST2P09228 141 aa16.59■□□□□ 0.25
PTCH1-227ENST00000553256 NR2C1P13056 603 aa16.59■□□□□ 0.25
PTCH1-227ENST00000553256 CTLA4P16410 223 aa16.59■□□□□ 0.25
PTCH1-227ENST00000553256 ZNF32P17041 273 aa16.59■□□□□ 0.25
PTCH1-227ENST00000553256 SDHAP31040 664 aa16.59■□□□□ 0.25
PTCH1-227ENST00000553256 PSG4Q00888 419 aa16.59■□□□□ 0.25
PTCH1-227ENST00000553256 RAB35Q15286 201 aa16.59■□□□□ 0.25
PTCH1-227ENST00000553256 RFX4Q33E94 735 aa16.59■□□□□ 0.25
PTCH1-227ENST00000553256 SLC36A2Q495M3 483 aa16.59■□□□□ 0.25
PTCH1-227ENST00000553256 DPY19L2P2Q6ZN68 376 aa16.59■□□□□ 0.25
PTCH1-227ENST00000553256 RRM2BQ7LG56 351 aa16.59■□□□□ 0.25
PTCH1-227ENST00000553256 LRRC18Q8N456 261 aa16.59■□□□□ 0.25
PTCH1-227ENST00000553256 ZNF525Q8N782 197 aa16.59■□□□□ 0.25
PTCH1-227ENST00000553256 SLC30A7Q8NEW0 376 aa16.59■□□□□ 0.25
PTCH1-227ENST00000553256 RASD2Q96D21 266 aa16.59■□□□□ 0.25
PTCH1-227ENST00000553256 ASB9Q96DX5 294 aa16.59■□□□□ 0.25
PTCH1-227ENST00000553256 POM121L2Q96KW2 1035 aa16.59■□□□□ 0.25
PTCH1-227ENST00000553256 BTBD10Q9BSF8 475 aa16.59■□□□□ 0.25
PTCH1-227ENST00000553256 TRIM15Q9C019 465 aa16.59■□□□□ 0.25
PTCH1-227ENST00000553256 WNT5BQ9H1J7 359 aa16.59■□□□□ 0.25
PTCH1-227ENST00000553256 IL20RAQ9UHF4 553 aa16.59■□□□□ 0.25
PTCH1-227ENST00000553256 PMF1-BGLAPU3KQ54 211 aa16.59■□□□□ 0.25
PTCH1-227ENST00000553256 LOC100509620A0A075B734 347 aa16.58■□□□□ 0.24
PTCH1-227ENST00000553256 VWC2LB2RUY7 222 aa16.58■□□□□ 0.24
PTCH1-227ENST00000553256 SMAD7O15105 426 aaKnown RBP16.58■□□□□ 0.24
PTCH1-227ENST00000553256 ARPC3O15145 178 aa16.58■□□□□ 0.24
PTCH1-227ENST00000553256 CCL2P13500 99 aa16.58■□□□□ 0.24
PTCH1-227ENST00000553256 LAP3P28838 519 aa16.58■□□□□ 0.24
PTCH1-227ENST00000553256 RPL4P36578 427 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms