RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 RBM15BQ8NDT2 890 aaKnown RBP13.66□□□□□ -0.22
CDK4-215ENST00000553237 GEMIN6Q8WXD5 167 aaKnown RBP13.66□□□□□ -0.22
CDK4-215ENST00000553237 MSI2Q96DH6 328 aaKnown RBP13.66□□□□□ -0.22
CDK4-215ENST00000553237 NSL1Q96IY1 281 aa13.66□□□□□ -0.22
CDK4-215ENST00000553237 MAN2C1Q9NTJ4 1040 aa13.66□□□□□ -0.22
CDK4-215ENST00000553237 NDE1Q9NXR1 346 aa13.66□□□□□ -0.22
CDK4-215ENST00000553237 STX18Q9P2W9 335 aaKnown RBP13.66□□□□□ -0.22
CDK4-215ENST00000553237 SLC7A8Q9UHI5 535 aa13.66□□□□□ -0.22
CDK4-215ENST00000553237 ZNF346Q9UL40 294 aaKnown RBP13.66□□□□□ -0.22
CDK4-215ENST00000553237 HIF3AQ9Y2N7 669 aa13.66□□□□□ -0.22
CDK4-215ENST00000553237 UGT2A1Q9Y4X1 527 aa13.66□□□□□ -0.22
CDK4-215ENST00000553237 ATRQ13535 2644 aa13.65□□□□□ -0.22
CDK4-215ENST00000553237 TRAV27A0A087WT01 109 aa13.65□□□□□ -0.22
CDK4-215ENST00000553237 GMNNO75496 209 aa13.65□□□□□ -0.22
CDK4-215ENST00000553237 HSD17B1P14061 328 aa13.65□□□□□ -0.22
CDK4-215ENST00000553237 ZNF23P17027 643 aa13.65□□□□□ -0.22
CDK4-215ENST00000553237 ZNF133P52736 654 aaPredicted RBP13.65□□□□□ -0.22
CDK4-215ENST00000553237 RPL27P61353 136 aaKnown RBP13.65□□□□□ -0.22
CDK4-215ENST00000553237 PLP2Q04941 152 aa13.65□□□□□ -0.22
CDK4-215ENST00000553237 ALKBH6Q3KRA9 238 aa13.65□□□□□ -0.22
CDK4-215ENST00000553237 NRN1LQ496H8 165 aa13.65□□□□□ -0.22
CDK4-215ENST00000553237 SAMD4BQ5PRF9 694 aaKnown RBP13.65□□□□□ -0.22
CDK4-215ENST00000553237 C10orf128Q5T292 105 aa13.65□□□□□ -0.22
CDK4-215ENST00000553237 ZNF730Q6ZMV8 503 aa13.65□□□□□ -0.22
CDK4-215ENST00000553237 DPPA2Q7Z7J5 298 aa13.65□□□□□ -0.22
CDK4-215ENST00000553237 CLDN22Q8N7P3 220 aa13.65□□□□□ -0.22
CDK4-215ENST00000553237 OR13C2Q8NGS9 318 aa13.65□□□□□ -0.22
CDK4-215ENST00000553237 NMD3Q96D46 503 aaKnown RBP13.65□□□□□ -0.22
CDK4-215ENST00000553237 BEX2Q9BXY8 128 aa13.65□□□□□ -0.22
CDK4-215ENST00000553237 KCNN2Q9H2S1 579 aa13.65□□□□□ -0.22
CDK4-215ENST00000553237 MS4A5Q9H3V2 200 aa13.65□□□□□ -0.22
CDK4-215ENST00000553237 CHODLQ9H9P2 273 aa13.65□□□□□ -0.22
CDK4-215ENST00000553237 SIAEQ9HAT2 523 aa13.65□□□□□ -0.22
CDK4-215ENST00000553237 CD300AQ9UGN4 299 aa13.65□□□□□ -0.22
CDK4-215ENST00000553237 RPS6KA6Q9UK32 745 aa13.65□□□□□ -0.22
CDK4-215ENST00000553237 CDC42EP3Q9UKI2 254 aa13.65□□□□□ -0.22
CDK4-215ENST00000553237 A0A087WUU8 490 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 IQCMA0A1B0GVH7 501 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 A0A1W2PPW3 197 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 NPIPB13A6NJU9 1138 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 EFCAB9A8MZ26 197 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 B2RBV5 119 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 NPIPB4C9JG80 1138 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 CLPTM1O96005 669 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 PTHP01270 115 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 HPXP02790 462 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 LCKP06239 509 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 MMP7P09237 267 aaPredicted RBP13.64□□□□□ -0.23
CDK4-215ENST00000553237 NAT2P11245 290 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 GIFP27352 417 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 APEX1P27695 318 aaKnown RBP13.64□□□□□ -0.23
CDK4-215ENST00000553237 MSX2P35548 267 aaPredicted RBP13.64□□□□□ -0.23
CDK4-215ENST00000553237 GPR4P46093 362 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 ERVS71-1P61550 626 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 MRPS34P82930 218 aaKnown RBP13.64□□□□□ -0.23
CDK4-215ENST00000553237 HSF2Q03933 536 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 PRKCDQ05655 676 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 TBC1D28Q2M2D7 210 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 PABPC1L2AQ5JQF8 200 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 RGS7BPQ6MZT1 257 aaPredicted RBP13.64□□□□□ -0.23
CDK4-215ENST00000553237 PODNL1Q6PEZ8 512 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 SLC25A47Q6Q0C1 308 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 OAFQ86UD1 273 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 LRRC75AQ8NAA5 344 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 ICA1LQ8NDH6 482 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 CPEB3Q8NE35 698 aaKnown RBP13.64□□□□□ -0.23
CDK4-215ENST00000553237 OR1J2Q8NGS2 313 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 BCAS4Q8TDM0 211 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 ACOT11Q8WXI4 607 aaPredicted RBP13.64□□□□□ -0.23
CDK4-215ENST00000553237 NABP1Q96AH0 204 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 RBP7Q96R05 134 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 SOX7Q9BT81 388 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 GORASP2Q9H8Y8 452 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 CCNB1IP1Q9NPC3 277 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 DCAF13Q9NV06 445 aaKnown RBP13.64□□□□□ -0.23
CDK4-215ENST00000553237 TAAR3PQ9P1P4 343 aa13.64□□□□□ -0.23
CDK4-215ENST00000553237 SLC22A23A1A5C7 686 aa13.63□□□□□ -0.23
CDK4-215ENST00000553237 HTR3EA5X5Y0 456 aa13.63□□□□□ -0.23
CDK4-215ENST00000553237 LILRA1O75019 489 aa13.63□□□□□ -0.23
CDK4-215ENST00000553237 PRSS23O95084 383 aa13.63□□□□□ -0.23
CDK4-215ENST00000553237 TGFAP01135 160 aa13.63□□□□□ -0.23
CDK4-215ENST00000553237 IFNA2P01563 188 aa13.63□□□□□ -0.23
CDK4-215ENST00000553237 T-ENOLP0DO92 83 aa13.63□□□□□ -0.23
CDK4-215ENST00000553237 ZNF32P17041 273 aa13.63□□□□□ -0.23
CDK4-215ENST00000553237 CCNOP22674 350 aa13.63□□□□□ -0.23
CDK4-215ENST00000553237 COL8A2P25067 703 aa13.63□□□□□ -0.23
CDK4-215ENST00000553237 APLNRP35414 380 aa13.63□□□□□ -0.23
CDK4-215ENST00000553237 ERVK-25P63136 954 aa13.63□□□□□ -0.23
CDK4-215ENST00000553237 FHL1Q13642 323 aa13.63□□□□□ -0.23
CDK4-215ENST00000553237 TAF11Q15544 211 aa13.63□□□□□ -0.23
CDK4-215ENST00000553237 TRIP10Q15642 601 aa13.63□□□□□ -0.23
CDK4-215ENST00000553237 ELFN2Q5R3F8 820 aa13.63□□□□□ -0.23
CDK4-215ENST00000553237 FAM166AQ6J272 317 aa13.63□□□□□ -0.23
CDK4-215ENST00000553237 IL17RELQ6ZVW7 336 aa13.63□□□□□ -0.23
CDK4-215ENST00000553237 MBOAT2Q6ZWT7 520 aa13.63□□□□□ -0.23
CDK4-215ENST00000553237 TSEN54Q7Z6J9 526 aaKnown RBP13.63□□□□□ -0.23
CDK4-215ENST00000553237 RNF113BQ8IZP6 322 aaKnown RBP13.63□□□□□ -0.23
CDK4-215ENST00000553237 FAM86B1Q8N7N1 296 aa13.63□□□□□ -0.23
CDK4-215ENST00000553237 TSPAN32Q96QS1 320 aa13.63□□□□□ -0.23
CDK4-215ENST00000553237 SNX18Q96RF0 628 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms