RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 LOC100289279A0A1B0GTE1 492 aa10.53□□□□□ -0.72
PPFIA2-227ENST00000552948 SLC16A7O60669 478 aa10.53□□□□□ -0.72
PPFIA2-227ENST00000552948 C11orf87Q6NUJ2 197 aa10.53□□□□□ -0.72
PPFIA2-227ENST00000552948 SLC39A5Q6ZMH5 540 aa10.53□□□□□ -0.72
PPFIA2-227ENST00000552948 MRPL43Q8N983 215 aaKnown RBP10.53□□□□□ -0.72
PPFIA2-227ENST00000552948 RCBTB1Q8NDN9 531 aa10.53□□□□□ -0.72
PPFIA2-227ENST00000552948 LCORQ96JN0 433 aaPredicted RBP10.53□□□□□ -0.72
PPFIA2-227ENST00000552948 PLXNB3Q9ULL4 1909 aa10.52□□□□□ -0.72
PPFIA2-227ENST00000552948 A0A1B0GV50 99 aa10.52□□□□□ -0.72
PPFIA2-227ENST00000552948 POM121BA6NF01 834 aa10.52□□□□□ -0.72
PPFIA2-227ENST00000552948 TMEM212A6NML5 194 aa10.52□□□□□ -0.72
PPFIA2-227ENST00000552948 PRR32B1ATL7 298 aa10.52□□□□□ -0.72
PPFIA2-227ENST00000552948 PRSS44E7EML9 344 aa10.52□□□□□ -0.72
PPFIA2-227ENST00000552948 DCTN6O00399 190 aa10.52□□□□□ -0.72
PPFIA2-227ENST00000552948 HCRTR2O43614 444 aa10.52□□□□□ -0.72
PPFIA2-227ENST00000552948 PGAM2P15259 253 aa10.52□□□□□ -0.72
PPFIA2-227ENST00000552948 S1PR1P21453 382 aa10.52□□□□□ -0.72
PPFIA2-227ENST00000552948 HTR2CP28335 458 aa10.52□□□□□ -0.72
PPFIA2-227ENST00000552948 GPR85P60893 370 aa10.52□□□□□ -0.72
PPFIA2-227ENST00000552948 SLC9A3R2Q15599 337 aa10.52□□□□□ -0.72
PPFIA2-227ENST00000552948 ANKRD16Q6P6B7 361 aa10.52□□□□□ -0.72
PPFIA2-227ENST00000552948 OR13C3Q8NGS6 347 aa10.52□□□□□ -0.72
PPFIA2-227ENST00000552948 FAM3CQ92520 227 aa10.52□□□□□ -0.72
PPFIA2-227ENST00000552948 IGFLR1Q9H665 355 aa10.52□□□□□ -0.72
PPFIA2-227ENST00000552948 CERS4Q9HA82 394 aa10.52□□□□□ -0.72
PPFIA2-227ENST00000552948 PNO1Q9NRX1 252 aaKnown RBP10.52□□□□□ -0.72
PPFIA2-227ENST00000552948 DNAJB12Q9NXW2 375 aaKnown RBP10.52□□□□□ -0.72
PPFIA2-227ENST00000552948 RASL12Q9NYN1 266 aa10.52□□□□□ -0.72
PPFIA2-227ENST00000552948 PURGQ9UJV8 347 aaKnown RBP10.52□□□□□ -0.72
PPFIA2-227ENST00000552948 FAM96BQ9Y3D0 163 aa10.52□□□□□ -0.72
PPFIA2-227ENST00000552948 M0R036 132 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 SCDO00767 359 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 CLDN4O14493 209 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 TXNL1O43396 289 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 FBXO24O75426 580 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 AKR7A3O95154 331 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 CXCL10P02778 98 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 SFTPBP07988 381 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 KRBOX4Q5JUW0 171 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 SLC35D3Q5M8T2 416 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 OR52W1Q6IF63 320 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 ACOT7LQ6ZUV0 252 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 MARCH3Q86UD3 253 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 STACQ99469 402 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 OR8D2Q9GZM6 311 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 PARP12Q9H0J9 701 aaKnown RBP10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 CREBZFQ9NS37 354 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 TAS2R4Q9NYW5 299 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 ZNF749O43361 778 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 OR2F2O95006 317 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 APOC1P02654 83 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 ITGA5P08648 1049 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 NAT2P11245 290 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 TPT1P13693 172 aaKnown RBP10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 ZNF823P16415 610 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 CBX5P45973 191 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 RASGEF1BQ0VAM2 473 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 OR2F1Q13607 317 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 TMEM41AQ96HV5 264 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 SLC41A2Q96JW4 573 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 MOGAT1Q96PD6 335 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 SLC25A21Q9BQT8 299 aaPredicted RBP10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 ELL3Q9HB65 397 aaPredicted RBP10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 SLC22A11Q9NSA0 550 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 NDRG3Q9UGV2 375 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 MKL2Q9ULH7 1088 aa10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 TCF20Q9UGU0 1960 aaKnown RBP10.52□□□□□ -0.73
PPFIA2-227ENST00000552948 TMEM272A0A1B0GTI8 110 aa10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 HRKO00198 91 aa10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 BCL2L11O43521 198 aa10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 SNAPINO95295 136 aa10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 APODP05090 189 aa10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 PI3P19957 117 aa10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 DRD3P35462 400 aa10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 RAB13P51153 203 aa10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 NOGQ13253 232 aa10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 ZNF425Q6IV72 752 aa10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 UNQ9370/PRO34162Q6UXP9 181 aa10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 SLC36A1Q7Z2H8 476 aa10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 MCATQ8IVS2 390 aaKnown RBP10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 NUDCD2Q8WVJ2 157 aa10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 RSPRY1Q96DX4 576 aa10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 CHMP1AQ9HD42 196 aaPredicted RBP10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 ZNF275Q9NSD4 429 aaPredicted RBP10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 SERTAD3Q9UJW9 196 aa10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 CSAG2Q9Y5P2 127 aa10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 PRSS38A1L453 326 aa10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 TMEM218A2RU14 115 aa10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 SERINC4A6NH21 518 aa10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 WNT11O96014 354 aa10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 GP1BAP07359 652 aa10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 CSF2RBP32927 897 aa10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 RIDAP52758 137 aaKnown RBP10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 CEBPGP53567 150 aa10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 RAB5BP61020 215 aa10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 ARFRP1Q13795 201 aa10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 PEA15Q15121 130 aa10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 WDR38Q5JTN6 314 aa10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 AVPI1Q5T686 147 aa10.51□□□□□ -0.73
PPFIA2-227ENST00000552948 FAM122BQ7Z309 247 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms