RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 LEG1Q6P5S2 330 aa10□□□□□ -0.81
TMEM116-218ENST00000552839 TFAP2EQ6VUC0 442 aa10□□□□□ -0.81
TMEM116-218ENST00000552839 ARIH2OSQ8N7S6 290 aa10□□□□□ -0.81
TMEM116-218ENST00000552839 SDR9C7Q8NEX9 313 aa10□□□□□ -0.81
TMEM116-218ENST00000552839 OR4K13Q8NH42 304 aa10□□□□□ -0.81
TMEM116-218ENST00000552839 CYGBQ8WWM9 190 aa10□□□□□ -0.81
TMEM116-218ENST00000552839 Q96M85 177 aa10□□□□□ -0.81
TMEM116-218ENST00000552839 PLA2G12AQ9BZM1 189 aa10□□□□□ -0.81
TMEM116-218ENST00000552839 NRIP3Q9NQ35 241 aa10□□□□□ -0.81
TMEM116-218ENST00000552839 ZNF701Q9NV72 531 aaPredicted RBP10□□□□□ -0.81
TMEM116-218ENST00000552839 SMPD3Q9NY59 655 aaPredicted RBP10□□□□□ -0.81
TMEM116-218ENST00000552839 IL20Q9NYY1 176 aa10□□□□□ -0.81
TMEM116-218ENST00000552839 PRSS50Q9UI38 385 aa10□□□□□ -0.81
TMEM116-218ENST00000552839 PRR14LQ5THK1 2151 aa9.99□□□□□ -0.81
TMEM116-218ENST00000552839 A0A1W2PPL8 197 aa9.99□□□□□ -0.81
TMEM116-218ENST00000552839 CENPBD1B2RD01 187 aa9.99□□□□□ -0.81
TMEM116-218ENST00000552839 IMPA2O14732 288 aa9.99□□□□□ -0.81
TMEM116-218ENST00000552839 TRMUO75648 421 aaKnown RBP9.99□□□□□ -0.81
TMEM116-218ENST00000552839 ALPLP05186 524 aa9.99□□□□□ -0.81
TMEM116-218ENST00000552839 IGFBP1P08833 259 aaPredicted RBP9.99□□□□□ -0.81
TMEM116-218ENST00000552839 TSPAN19P0C672 248 aa9.99□□□□□ -0.81
TMEM116-218ENST00000552839 APEHP13798 732 aaKnown RBP9.99□□□□□ -0.81
TMEM116-218ENST00000552839 GRK5P34947 590 aa9.99□□□□□ -0.81
TMEM116-218ENST00000552839 CAPZA2P47755 286 aa9.99□□□□□ -0.81
TMEM116-218ENST00000552839 RPS7P62081 194 aaKnown RBP9.99□□□□□ -0.81
TMEM116-218ENST00000552839 ROR2Q01974 943 aaKnown RBP9.99□□□□□ -0.81
TMEM116-218ENST00000552839 NPRL3Q12980 569 aa9.99□□□□□ -0.81
TMEM116-218ENST00000552839 STK11Q15831 433 aa9.99□□□□□ -0.81
TMEM116-218ENST00000552839 SNAPC1Q16533 368 aa9.99□□□□□ -0.81
TMEM116-218ENST00000552839 MESTQ5EB52 335 aa9.99□□□□□ -0.81
TMEM116-218ENST00000552839 TSPO2Q5TGU0 170 aa9.99□□□□□ -0.81
TMEM116-218ENST00000552839 ANKRD34AQ69YU3 496 aa9.99□□□□□ -0.81
TMEM116-218ENST00000552839 ZIC4Q8N9L1 334 aa9.99□□□□□ -0.81
TMEM116-218ENST00000552839 ZNF610Q8N9Z0 462 aa9.99□□□□□ -0.81
TMEM116-218ENST00000552839 OR52E2Q8NGJ4 325 aa9.99□□□□□ -0.81
TMEM116-218ENST00000552839 OR8D4Q8NGM9 314 aa9.99□□□□□ -0.81
TMEM116-218ENST00000552839 TMEM171Q8WVE6 324 aa9.99□□□□□ -0.81
TMEM116-218ENST00000552839 NSMAFQ92636 917 aa9.99□□□□□ -0.81
TMEM116-218ENST00000552839 KISS1RQ969F8 398 aaPredicted RBP9.99□□□□□ -0.81
TMEM116-218ENST00000552839 RDH12Q96NR8 316 aa9.99□□□□□ -0.81
TMEM116-218ENST00000552839 TVP23BQ9NYZ1 205 aa9.99□□□□□ -0.81
TMEM116-218ENST00000552839 GLTPQ9NZD2 209 aa9.99□□□□□ -0.81
TMEM116-218ENST00000552839 NKX1-2Q9UD57 310 aaPredicted RBP9.99□□□□□ -0.81
TMEM116-218ENST00000552839 ING1Q9UK53 422 aaPredicted RBP9.99□□□□□ -0.81
TMEM116-218ENST00000552839 POLR1DQ9Y2S0 133 aa9.99□□□□□ -0.81
TMEM116-218ENST00000552839 PRSS37A4D1T9 235 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 PRR23D1E9PI22 279 aaPredicted RBP9.98□□□□□ -0.81
TMEM116-218ENST00000552839 C16orf97H3BN30 126 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 ARPC3O15145 178 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 UPK3AO75631 287 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 FARS2O95363 451 aaKnown RBP9.98□□□□□ -0.81
TMEM116-218ENST00000552839 HLA-DQA2P01906 255 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 PRR23D2P0DMB1 279 aaPredicted RBP9.98□□□□□ -0.81
TMEM116-218ENST00000552839 HIST1H1CP16403 213 aaKnown RBP9.98□□□□□ -0.81
TMEM116-218ENST00000552839 CRABP1P29762 137 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 SH3BGRP55822 239 aaPredicted RBP9.98□□□□□ -0.81
TMEM116-218ENST00000552839 ATP5J2P56134 94 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 FXYD6P3P58550 94 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 LGALS3BPQ08380 585 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 GUSBP1Q15486 140 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 SNCBQ16143 134 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 OGFRL1Q5TC84 451 aaPredicted RBP9.98□□□□□ -0.81
TMEM116-218ENST00000552839 Q6ZT83 130 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 C20orf196Q8IYI0 205 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 TMEM123Q8N131 208 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 LNX2Q8N448 690 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 LRRC75AQ8NAA5 344 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 PROKR2Q8NFJ6 384 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 ZNF519Q8TB69 540 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 FAM81AQ8TBF8 368 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 TMEM158Q8WZ71 300 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 LRR1Q96L50 414 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 GABARAPL3Q9BY60 117 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 LINC00470Q9BZP3 86 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 SYT4Q9H2B2 425 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 KCNN2Q9H2S1 579 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 TOR3AQ9H497 397 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 SLC25A19Q9HC21 320 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 CRLF2Q9HC73 371 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 PLSCR4Q9NRQ2 329 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 SLC7A10Q9NS82 523 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 ELOVL5Q9NYP7 299 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 TAS2R16Q9NYV7 291 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 H2AFY2Q9P0M6 372 aaPredicted RBP9.98□□□□□ -0.81
TMEM116-218ENST00000552839 REV1Q9UBZ9 1251 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 MALT1Q9UDY8 824 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 GMPPBQ9Y5P6 360 aa9.98□□□□□ -0.81
TMEM116-218ENST00000552839 STAB1Q9NY15 2570 aa9.97□□□□□ -0.81
TMEM116-218ENST00000552839 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.97□□□□□ -0.81
TMEM116-218ENST00000552839 RNF223E7ERA6 249 aa9.97□□□□□ -0.81
TMEM116-218ENST00000552839 BHLHE40O14503 412 aa9.97□□□□□ -0.81
TMEM116-218ENST00000552839 CASQ2O14958 399 aaPredicted RBP9.97□□□□□ -0.81
TMEM116-218ENST00000552839 AHCYL1O43865 530 aa9.97□□□□□ -0.81
TMEM116-218ENST00000552839 KHDRBS3O75525 346 aaKnown RBP9.97□□□□□ -0.81
TMEM116-218ENST00000552839 RAD51DO75771 328 aa9.97□□□□□ -0.81
TMEM116-218ENST00000552839 LYZL6O75951 148 aa9.97□□□□□ -0.81
TMEM116-218ENST00000552839 TXNDC12O95881 172 aa9.97□□□□□ -0.81
TMEM116-218ENST00000552839 PLAUP00749 431 aa9.97□□□□□ -0.81
TMEM116-218ENST00000552839 CGAP01215 116 aa9.97□□□□□ -0.81
TMEM116-218ENST00000552839 IFNA2P01563 188 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms