RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 CYP2S1Q96SQ9 504 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 NIPSNAP3BQ9BS92 247 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 GPR61Q9BZJ8 451 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 NAT10Q9H0A0 1025 aaKnown RBP4.16□□□□□ -1.74
CPSF6-206ENST00000550987 GLIPR2Q9H4G4 154 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 SIGLEC8Q9NYZ4 499 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 ONECUT1Q9UBC0 465 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 SCML2Q9UQR0 700 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 C15orf41Q9Y2V0 281 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 IFT52Q9Y366 437 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 PTPRDP23468 1912 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 ABCA4P78363 2273 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 PLXND1Q9Y4D7 1925 aa4.15□□□□□ -1.74
CPSF6-206ENST00000550987 BAZ2BQ9UIF8 2168 aaKnown RBP4.15□□□□□ -1.75
CPSF6-206ENST00000550987 ZNF840PA6NDX5 716 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 ZNF716A6NP11 495 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 B4DXG7 233 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 NBR2O15453 112 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 PFKFB2O60825 505 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 CRTAPO75718 401 aaPredicted RBP4.15□□□□□ -1.75
CPSF6-206ENST00000550987 KBTBD11O94819 623 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 AP2A1O95782 977 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 OTCP00480 354 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 IGHV3-13P01766 116 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 ZNF735P0CB33 412 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 ZNF883P0CG24 379 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 STAG3L3P0CL85 134 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 COX6B1P14854 86 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 PGAM2P15259 253 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 CCR1P32246 355 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 EFNA3P52797 238 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 SUCLG1P53597 346 aaKnown RBP4.15□□□□□ -1.75
CPSF6-206ENST00000550987 OGDHQ02218 1023 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 SLC10A7Q0GE19 358 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 QRICH1Q2TAL8 776 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 KLHL38Q2WGJ6 581 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 TIGITQ495A1 244 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 C1orf185Q5T7R7 199 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 GFI1BQ5VTD9 330 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 LIPNQ5VXI9 398 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 CLEC2AQ6UVW9 174 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 ZNF440Q8IYI8 595 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 CADM2Q8N3J6 435 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 OR4D9Q8NGE8 314 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 HTR3CQ8WXA8 447 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 MRPS31Q92665 395 aaKnown RBP4.15□□□□□ -1.75
CPSF6-206ENST00000550987 CXorf40BQ96DE9 158 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 SOSTQ9BQB4 213 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 SLC35A5Q9BS91 424 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 CHRDL1Q9BU40 450 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 PARD6BQ9BYG5 372 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 RAB34Q9BZG1 259 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 RHBGQ9H310 441 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 ZNF385DQ9H6B1 395 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 EXO5Q9H790 373 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 SMYD3Q9H7B4 428 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 CAB39LQ9H9S4 337 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 POPDC2Q9HBU9 364 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 MED4Q9NPJ6 270 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 LZTFL1Q9NQ48 299 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 SLC2A8Q9NY64 477 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 BFARQ9NZS9 450 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 WRAP73Q9P2S5 460 aaPredicted RBP4.15□□□□□ -1.75
CPSF6-206ENST00000550987 DPM3Q9P2X0 92 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 CD300AQ9UGN4 299 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 COPS3Q9UNS2 423 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 RASD1Q9Y272 281 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 PRSS21Q9Y6M0 314 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 IGSF9BQ9UPX0 1349 aa4.15□□□□□ -1.75
CPSF6-206ENST00000550987 KIAA1549LQ6ZVL6 1849 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 GSTTP1A0A1W2PQM5 241 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 H0YHG0 523 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 M0QZ92 97 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 SULT2B1O00204 365 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 HIP1O00291 1037 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 SLC17A2O00624 439 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 ZNF264O43296 627 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 OR10H3O60404 316 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 SCRG1O75711 98 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 GNA14O95837 355 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 AGTP01019 485 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 HOXD4P09016 255 aaPredicted RBP4.14□□□□□ -1.75
CPSF6-206ENST00000550987 TROVE2P10155 538 aaKnown RBP eCLIP4.14□□□□□ -1.75
CPSF6-206ENST00000550987 RALBP11234 206 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 HPGDP15428 266 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 ADORA2BP29275 332 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 FGF9P31371 208 aaPredicted RBP4.14□□□□□ -1.75
CPSF6-206ENST00000550987 RPL29P47914 159 aaKnown RBP4.14□□□□□ -1.75
CPSF6-206ENST00000550987 DAP3P51398 398 aaKnown RBP4.14□□□□□ -1.75
CPSF6-206ENST00000550987 LIM2P55344 173 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 RPL32P62910 135 aaKnown RBP4.14□□□□□ -1.75
CPSF6-206ENST00000550987 TPM4P67936 248 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 MRPS11P82912 194 aaKnown RBP4.14□□□□□ -1.75
CPSF6-206ENST00000550987 C14orf177Q52M58 125 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 CTSL3PQ5NE16 218 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 ARMC12Q5T9G4 340 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 PRAMEF20Q5VT98 475 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 KDM7AQ6ZMT4 941 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 ZNF497Q6ZNH5 498 aa4.14□□□□□ -1.75
CPSF6-206ENST00000550987 NKAIN4Q8IVV8 208 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms