RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 BSPH1Q075Z2 132 aa14.16□□□□□ -0.14
CHMP1A-209ENST00000550872 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.16□□□□□ -0.14
CHMP1A-209ENST00000550872 GINS1Q14691 196 aa14.16□□□□□ -0.14
CHMP1A-209ENST00000550872 ETFDHQ16134 617 aa14.16□□□□□ -0.14
CHMP1A-209ENST00000550872 NRN1LQ496H8 165 aa14.16□□□□□ -0.14
CHMP1A-209ENST00000550872 TMEM108Q6UXF1 575 aa14.16□□□□□ -0.14
CHMP1A-209ENST00000550872 CDC20BQ86Y33 519 aa14.16□□□□□ -0.14
CHMP1A-209ENST00000550872 IQCF1Q8N6M8 205 aa14.16□□□□□ -0.14
CHMP1A-209ENST00000550872 SDR9C7Q8NEX9 313 aa14.16□□□□□ -0.14
CHMP1A-209ENST00000550872 SNX18Q96RF0 628 aa14.16□□□□□ -0.14
CHMP1A-209ENST00000550872 NUAK2Q9H093 628 aa14.16□□□□□ -0.14
CHMP1A-209ENST00000550872 GABARAPL1Q9H0R8 117 aa14.16□□□□□ -0.14
CHMP1A-209ENST00000550872 SIAEQ9HAT2 523 aa14.16□□□□□ -0.14
CHMP1A-209ENST00000550872 SRA1Q9HD15 236 aaKnown RBP14.16□□□□□ -0.14
CHMP1A-209ENST00000550872 KRT84Q9NSB2 600 aa14.16□□□□□ -0.14
CHMP1A-209ENST00000550872 ZNF503-AS2A6NEH8 195 aa14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 MGRN1O60291 552 aa14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 MITFO75030 526 aaPredicted RBP14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 UBL3O95164 117 aa14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 BAG2O95816 211 aa14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 PATE4P0C8F1 98 aa14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 PTAFRP25105 342 aa14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 ARR3P36575 388 aa14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 GIPRP48546 466 aa14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 CENPAP49450 140 aa14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 KRTAP10-9P60411 292 aa14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 GSG1Q2KHT4 349 aa14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 PGGHGQ32M88 737 aa14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 SLC27A4Q6P1M0 643 aa14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 DNM1P34Q6PK57 102 aa14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 SLC16A14Q7RTX9 510 aa14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 MDP1Q86V88 176 aa14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 PQLC1Q8N2U9 271 aa14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 LRRC18Q8N456 261 aa14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 CYB561A3Q8NBI2 242 aa14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 NPEPL1Q8NDH3 523 aa14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 FOXN4Q96NZ1 517 aa14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 TSSK2Q96PF2 358 aa14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 KCNN2Q9H2S1 579 aa14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 RNF121Q9H920 327 aa14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 MOV10Q9HCE1 1003 aaKnown RBP14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 RPRD1BQ9NQG5 326 aaKnown RBP14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 B3GNT2Q9NY97 397 aa14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 KLHL21Q9UJP4 597 aa14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 B9D1Q9UPM9 204 aa14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 COA3Q9Y2R0 106 aaPredicted RBP14.15□□□□□ -0.14
CHMP1A-209ENST00000550872 APCP25054 2843 aa14.14□□□□□ -0.15
CHMP1A-209ENST00000550872 OR6C68A6NDL8 312 aa14.14□□□□□ -0.15
CHMP1A-209ENST00000550872 RAB36O95755 333 aa14.14□□□□□ -0.15
CHMP1A-209ENST00000550872 PLAUP00749 431 aa14.14□□□□□ -0.15
CHMP1A-209ENST00000550872 IFNGP01579 166 aa14.14□□□□□ -0.15
CHMP1A-209ENST00000550872 CD40P25942 277 aa14.14□□□□□ -0.15
CHMP1A-209ENST00000550872 LAP3P28838 519 aa14.14□□□□□ -0.15
CHMP1A-209ENST00000550872 GRK5P34947 590 aa14.14□□□□□ -0.15
CHMP1A-209ENST00000550872 IDH3GP51553 393 aaPredicted RBP14.14□□□□□ -0.15
CHMP1A-209ENST00000550872 CRISP1P54107 249 aa14.14□□□□□ -0.15
CHMP1A-209ENST00000550872 RAB1AP62820 205 aa14.14□□□□□ -0.15
CHMP1A-209ENST00000550872 NPRL3Q12980 569 aa14.14□□□□□ -0.15
CHMP1A-209ENST00000550872 SLC36A2Q495M3 483 aa14.14□□□□□ -0.15
CHMP1A-209ENST00000550872 FAM27BQ5VT28 67 aa14.14□□□□□ -0.15
CHMP1A-209ENST00000550872 KDM4DQ6B0I6 523 aa14.14□□□□□ -0.15
CHMP1A-209ENST00000550872 ACSM5Q6NUN0 579 aa14.14□□□□□ -0.15
CHMP1A-209ENST00000550872 FOXL2NBQ6ZUU3 175 aa14.14□□□□□ -0.15
CHMP1A-209ENST00000550872 DPPA2Q7Z7J5 298 aa14.14□□□□□ -0.15
CHMP1A-209ENST00000550872 PARP8Q8N3A8 854 aa14.14□□□□□ -0.15
CHMP1A-209ENST00000550872 FAM169BQ8N8A8 192 aa14.14□□□□□ -0.15
CHMP1A-209ENST00000550872 FGFBP3Q8TAT2 258 aa14.14□□□□□ -0.15
CHMP1A-209ENST00000550872 NABP1Q96AH0 204 aa14.14□□□□□ -0.15
CHMP1A-209ENST00000550872 SLC38A2Q96QD8 506 aa14.14□□□□□ -0.15
CHMP1A-209ENST00000550872 FN3KQ9H479 309 aa14.14□□□□□ -0.15
CHMP1A-209ENST00000550872 ZNF224Q9NZL3 707 aa14.14□□□□□ -0.15
CHMP1A-209ENST00000550872 CRNNQ9UBG3 495 aaPredicted RBP14.14□□□□□ -0.15
CHMP1A-209ENST00000550872 RNF115Q9Y4L5 304 aa14.14□□□□□ -0.15
CHMP1A-209ENST00000550872 ADGRG4Q8IZF6 3080 aa14.14□□□□□ -0.15
CHMP1A-209ENST00000550872 IGHV1-18A0A0C4DH31 117 aa14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 A0A1W2PPR1 153 aa14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 RIIAD1A6NNX1 92 aa14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 DCTN6O00399 190 aa14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 ABCD4O14678 606 aa14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 HMGN1P05114 100 aa14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 MSR1P21757 451 aa14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 PTDSS1P48651 473 aaKnown RBP14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 ESRRGP62508 458 aa14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 CDK5Q00535 292 aa14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 ZNF362Q5T0B9 420 aaPredicted RBP14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 TMEM236Q5W0B7 351 aa14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 TMEM53Q6P2H8 277 aa14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 ZNF704Q6ZNC4 412 aaPredicted RBP14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 GLB1L2Q8IW92 636 aa14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 OR6V1Q8N148 313 aa14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 PIAS4Q8N2W9 510 aaPredicted RBP14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 SLC37A3Q8NCC5 494 aa14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 DDOQ99489 341 aa14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 CIB1Q99828 191 aa14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 RBM4BQ9BQ04 359 aaKnown RBP14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 TMEM204Q9BSN7 226 aa14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 RBM4Q9BWF3 364 aaKnown RBP14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 OSBPL10Q9BXB5 764 aa14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 TEX12Q9BXU0 123 aa14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 NOX3Q9HBY0 568 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms