RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 OR4K5Q8NGD3 323 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 OR6T1Q8NGN1 323 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 OR1J2Q8NGS2 313 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 ZNF519Q8TB69 540 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 SYNPRQ8TBG9 265 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 LRRC8CQ8TDW0 803 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 ZNF418Q8TF45 676 aaPredicted RBP6.51□□□□□ -1.37
NEK3-201ENST00000550331 SNX33Q8WV41 574 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 RASSF5Q8WWW0 418 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 STON2Q8WXE9 905 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 SEPHS2Q99611 448 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 BCL2L14Q9BZR8 327 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 NARFLQ9H6Q4 476 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 C7orf69Q9H7B7 122 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 HINT3Q9NQE9 182 aaKnown RBP6.51□□□□□ -1.37
NEK3-201ENST00000550331 NKIRAS2Q9NYR9 191 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 TREM2Q9NZC2 230 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 TAAR3PQ9P1P4 343 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 LEF1Q9UJU2 399 aaPredicted RBP6.51□□□□□ -1.37
NEK3-201ENST00000550331 TRIM33Q9UPN9 1127 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 CMYA5Q8N3K9 4069 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 PRKDCP78527 4128 aaKnown RBP6.51□□□□□ -1.37
NEK3-201ENST00000550331 IQCMA0A1B0GVH7 501 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 CPSF4LA6NMK7 179 aaKnown RBP6.5□□□□□ -1.37
NEK3-201ENST00000550331 M0QX08 132 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 KPNA4O00629 521 aaPredicted RBP6.5□□□□□ -1.37
NEK3-201ENST00000550331 WNT9BO14905 357 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 ANGPT2O15123 496 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 VENTXO95231 258 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 BCL10O95999 233 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 MT-ND5P03915 603 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 OPN1SWP03999 348 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 THY1P04216 161 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 HIST1H2ABP04908 130 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 QDPRP09417 244 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 CD247P20963 164 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 CRYBB2P43320 205 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 MAGEB1P43366 347 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 COMPP49747 757 aaPredicted RBP6.5□□□□□ -1.37
NEK3-201ENST00000550331 DAP3P51398 398 aaKnown RBP6.5□□□□□ -1.37
NEK3-201ENST00000550331 ZNF133P52736 654 aaPredicted RBP6.5□□□□□ -1.37
NEK3-201ENST00000550331 UCP2P55851 309 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 MTPNP58546 118 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 HILS1P60008 231 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 LMO4P61968 165 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 PLP2Q04941 152 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 MELKQ14680 651 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 TBC1D28Q2M2D7 210 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 BEND6Q5SZJ8 279 aaPredicted RBP6.5□□□□□ -1.37
NEK3-201ENST00000550331 INTS11Q5TA45 600 aaKnown RBP6.5□□□□□ -1.37
NEK3-201ENST00000550331 AGBL2Q5U5Z8 902 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 FAHD2BQ6P2I3 314 aaPredicted RBP6.5□□□□□ -1.37
NEK3-201ENST00000550331 TMEM154Q6P9G4 183 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 USP43Q70EL4 1123 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 HIST3H2AQ7L7L0 130 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 SLC16A14Q7RTX9 510 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 HDDC2Q7Z4H3 204 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 NANOGNBQ7Z5D8 188 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 PAQR4Q8N4S7 273 aaPredicted RBP6.5□□□□□ -1.37
NEK3-201ENST00000550331 LRRC17Q8N6Y2 441 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 NOXO1Q8NFA2 376 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 OR4D11Q8NGI4 311 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 VANGL1Q8TAA9 524 aaPredicted RBP6.5□□□□□ -1.37
NEK3-201ENST00000550331 FGFBP3Q8TAT2 258 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 TSPEARQ8WU66 669 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 C11orf40Q8WZ69 217 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 HIST1H2ACQ93077 130 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 RAB39BQ96DA2 213 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 FAHD2AQ96GK7 314 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 SH3GL3Q99963 347 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 MRPL13Q9BYD1 178 aaKnown RBP6.5□□□□□ -1.37
NEK3-201ENST00000550331 LRMDAQ9H2I8 198 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 KAT8Q9H7Z6 458 aaKnown RBP6.5□□□□□ -1.37
NEK3-201ENST00000550331 RNF121Q9H920 327 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 CDH20Q9HBT6 801 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 LPAR2Q9HBW0 351 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 SRA1Q9HD15 236 aaKnown RBP6.5□□□□□ -1.37
NEK3-201ENST00000550331 STX18Q9P2W9 335 aaKnown RBP6.5□□□□□ -1.37
NEK3-201ENST00000550331 SLC7A7Q9UM01 511 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 NDUFAF1Q9Y375 327 aa6.5□□□□□ -1.37
NEK3-201ENST00000550331 IGHV1-69-2A0A0G2JMI3 117 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 A0A0G2JMP0 313 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 A0A0X1KG70 313 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 A0A1W2PRG6 482 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 CLDN25C9JDP6 229 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 J3QLI3 93 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 CDC14BO60729 498 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 CLPTM1O96005 669 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 IGF2P01344 180 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 IGHV3-13P01766 116 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 MT-ND1P03886 318 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 LCKP06239 509 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 MMP7P09237 267 aaPredicted RBP6.49□□□□□ -1.37
NEK3-201ENST00000550331 UMPSP11172 480 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 CCL2P13500 99 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 ACADSP16219 412 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 EPHA1P21709 976 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 PCGF2P35227 344 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 RBM34P42696 430 aaKnown RBP6.49□□□□□ -1.37
NEK3-201ENST00000550331 ZNF84P51523 738 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms