RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 ZCCHC18P0CG32 403 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 GCH1P30793 250 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 MVDP53602 400 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 SELENOVP59797 346 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 CCL8P80075 99 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 NKPD1Q17RQ9 610 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 MS4A18Q3C1V0 323 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 RABL3Q5HYI8 236 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 RGS7BPQ6MZT1 257 aaPredicted RBP11.5□□□□□ -0.57
CDX2-202ENST00000548877 ERICH5Q6P6B1 374 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 TMEM154Q6P9G4 183 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 SERPINA11Q86U17 422 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 OR2T12Q8NG77 320 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 OR6S1Q8NH40 331 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 ZNF417Q8TAU3 575 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 PNPT1Q8TCS8 783 aaKnown RBP11.5□□□□□ -0.57
CDX2-202ENST00000548877 C22orf15Q8WYQ4 148 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 RAB1CQ92928 201 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 TAAR8Q969N4 342 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 PANX1Q96RD7 426 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 ZNF587Q96SQ5 575 aaPredicted RBP11.5□□□□□ -0.57
CDX2-202ENST00000548877 PAIP1Q9H074 479 aaKnown RBP11.5□□□□□ -0.57
CDX2-202ENST00000548877 PCDHAC1Q9H158 963 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 RAD21L1Q9H4I0 556 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 B3GAT2Q9NPZ5 323 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 SLCO1C1Q9NYB5 712 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 PLEK2Q9NYT0 353 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 POFUT2Q9Y2G5 429 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 POLR3KQ9Y2Y1 108 aaPredicted RBP11.5□□□□□ -0.57
CDX2-202ENST00000548877 LRRC42Q9Y546 428 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 MMP24Q9Y5R2 645 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 GMEB1Q9Y692 573 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 TANC2Q9HCD6 1990 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 TRBV5-3A0A0A0MS03 114 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 DHRS12A0PJE2 317 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 FAM220BPB1ANY3 271 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 ARPC2O15144 300 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 CLPTM1O96005 669 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 B4GALT1P15291 398 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 GRPRP30550 384 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 RAD52P43351 418 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 KLF3P57682 345 aaPredicted RBP11.49□□□□□ -0.57
CDX2-202ENST00000548877 RAB39AQ14964 217 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 LARS2Q15031 903 aaKnown RBP11.49□□□□□ -0.57
CDX2-202ENST00000548877 FAM209AQ5JX71 171 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 PIWIL3Q7Z3Z3 882 aaKnown RBP11.49□□□□□ -0.57
CDX2-202ENST00000548877 UEVLDQ8IX04 471 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 FAM156AQ8NDB6 213 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 DEFB108BQ8NET1 73 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 ZNF519Q8TB69 540 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 SYNPRQ8TBG9 265 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 DNAJC9Q8WXX5 260 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 SLC38A4Q969I6 547 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 TIMD4Q96H15 378 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 NSMCE2Q96MF7 247 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 FOXB1Q99853 325 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 CPPED1Q9BRF8 314 aaPredicted RBP11.49□□□□□ -0.57
CDX2-202ENST00000548877 C1QTNF5Q9BXJ0 243 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 ARMC7Q9H6L4 198 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 C8orf4Q9NR00 106 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 ARMC1Q9NVT9 282 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 VAPAQ9P0L0 249 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 SLAMF8Q9P0V8 285 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 P2RX2Q9UBL9 471 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 NUP50Q9UKX7 468 aa11.49□□□□□ -0.57
CDX2-202ENST00000548877 ELOVL7A1L3X0 281 aa11.48□□□□□ -0.57
CDX2-202ENST00000548877 H3BNX3 289 aa11.48□□□□□ -0.57
CDX2-202ENST00000548877 KRT75O95678 551 aa11.48□□□□□ -0.57
CDX2-202ENST00000548877 SNAP29O95721 258 aa11.48□□□□□ -0.57
CDX2-202ENST00000548877 HPRP00739 348 aa11.48□□□□□ -0.57
CDX2-202ENST00000548877 HLA-DOBP13765 273 aa11.48□□□□□ -0.57
CDX2-202ENST00000548877 ACADSP16219 412 aa11.48□□□□□ -0.57
CDX2-202ENST00000548877 ZFP36P26651 326 aaKnown RBP11.48□□□□□ -0.57
CDX2-202ENST00000548877 MSX2P35548 267 aaPredicted RBP11.48□□□□□ -0.57
CDX2-202ENST00000548877 CDKN2CP42773 168 aa11.48□□□□□ -0.57
CDX2-202ENST00000548877 CRISP3P54108 245 aa11.48□□□□□ -0.57
CDX2-202ENST00000548877 MTPNP58546 118 aa11.48□□□□□ -0.57
CDX2-202ENST00000548877 CAMK2DQ13557 499 aa11.48□□□□□ -0.57
CDX2-202ENST00000548877 MOGQ16653 247 aa11.48□□□□□ -0.57
CDX2-202ENST00000548877 KLF17Q5JT82 389 aaPredicted RBP11.48□□□□□ -0.57
CDX2-202ENST00000548877 FKBP9P1Q75LS8 142 aa11.48□□□□□ -0.57
CDX2-202ENST00000548877 LSMEM1Q8N8F7 131 aa11.48□□□□□ -0.57
CDX2-202ENST00000548877 SCAIQ8N9R8 606 aa11.48□□□□□ -0.57
CDX2-202ENST00000548877 SLC38A5Q8WUX1 472 aa11.48□□□□□ -0.57
CDX2-202ENST00000548877 SNX33Q8WV41 574 aa11.48□□□□□ -0.57
CDX2-202ENST00000548877 ZNF48Q96MX3 618 aaPredicted RBP11.48□□□□□ -0.57
CDX2-202ENST00000548877 TSPAN32Q96QS1 320 aa11.48□□□□□ -0.57
CDX2-202ENST00000548877 ZNF184Q99676 751 aaPredicted RBP11.48□□□□□ -0.57
CDX2-202ENST00000548877 KAT8Q9H7Z6 458 aaKnown RBP11.48□□□□□ -0.57
CDX2-202ENST00000548877 GORASP2Q9H8Y8 452 aa11.48□□□□□ -0.57
CDX2-202ENST00000548877 ZNF69Q9UC07 566 aa11.48□□□□□ -0.57
CDX2-202ENST00000548877 ZNF232Q9UNY5 417 aa11.48□□□□□ -0.57
CDX2-202ENST00000548877 IFT52Q9Y366 437 aa11.48□□□□□ -0.57
CDX2-202ENST00000548877 IGKV1D-42A0A075B6H8 117 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 TRAV36DV7A0A075B6V5 113 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 A0A087WUJ7 227 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 A0A0G2JPF8 293 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 HNRNPCL2B2RXH8 293 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 HNRNPCL3B7ZW38 293 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 FOXH1O75593 365 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms