RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 ZNHIT1O43257 154 aa12.86□□□□□ -0.35
CACNB3-209ENST00000548860 STEAP1BQ6NZ63 245 aa12.86□□□□□ -0.35
CACNB3-209ENST00000548860 NPEPL1Q8NDH3 523 aa12.86□□□□□ -0.35
CACNB3-209ENST00000548860 OR51A2Q8NGJ7 313 aa12.86□□□□□ -0.35
CACNB3-209ENST00000548860 PHOSPHO2Q8TCD6 241 aa12.86□□□□□ -0.35
CACNB3-209ENST00000548860 ZDHHC12Q96GR4 267 aa12.86□□□□□ -0.35
CACNB3-209ENST00000548860 FSCN3Q9NQT6 498 aa12.86□□□□□ -0.35
CACNB3-209ENST00000548860 DLL4Q9NR61 685 aa12.86□□□□□ -0.35
CACNB3-209ENST00000548860 HELZP42694 1942 aaKnown RBP12.86□□□□□ -0.35
CACNB3-209ENST00000548860 THSD7BQ9C0I4 1608 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 TMED7-TICAM2A0A0A6YYA0 188 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 AIPO00170 330 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 NKX2-2O95096 273 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 CD38P28907 300 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 CD276Q5ZPR3 534 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 THAP6Q8TBB0 222 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 SAV1Q9H4B6 383 aaPredicted RBP12.85□□□□□ -0.35
CACNB3-209ENST00000548860 SLC39A1Q9NY26 324 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 TMED7Q9Y3B3 224 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 A0A087WUJ7 227 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 RGS13O14921 159 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 PIN1P1O15428 100 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 SC5DO75845 299 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 TRAPPC2P0DI81 140 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 TRAPPC2BP0DI82 140 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 PNMTP11086 282 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 RSPO4Q2I0M5 234 aaPredicted RBP12.85□□□□□ -0.35
CACNB3-209ENST00000548860 ZNF704Q6ZNC4 412 aaPredicted RBP12.85□□□□□ -0.35
CACNB3-209ENST00000548860 STEAP2Q8NFT2 490 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 NEK7Q8TDX7 302 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 SMIM4Q8WVI0 70 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 LRRC61Q9BV99 259 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 FRRS1LQ9P0K9 344 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 MTCL1Q9Y4B5 1905 aaKnown RBP12.85□□□□□ -0.35
CACNB3-209ENST00000548860 A0A1B0GW55 424 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 PMP2P02689 132 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 DUX4L2P0CJ85 424 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 DUX4L3P0CJ86 424 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 DUX4L4P0CJ87 422 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 DUX4L5P0CJ88 424 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 DUX4L6P0CJ89 424 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 DUX4L7P0CJ90 424 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 DRD1P21728 446 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 TNFRSF4P43489 277 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 CLRN1P58418 232 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 GLO1Q04760 184 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 PLA1AQ53H76 456 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 WDR38Q5JTN6 314 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 TSSK4Q6SA08 328 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.85□□□□□ -0.35
CACNB3-209ENST00000548860 TMEM185AQ8NFB2 350 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 SLC2A12Q8TD20 617 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 KISS1RQ969F8 398 aaPredicted RBP12.85□□□□□ -0.35
CACNB3-209ENST00000548860 GSX2Q9BZM3 304 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 POFUT1Q9H488 388 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 ZNF304Q9HCX3 659 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 FGF21Q9NSA1 209 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 CTSFQ9UBX1 484 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 DUX4Q9UBX2 424 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 SUSD2Q9UGT4 822 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 MRM2Q9UI43 246 aaKnown RBP12.85□□□□□ -0.35
CACNB3-209ENST00000548860 ZNF223Q9UK11 482 aaPredicted RBP12.85□□□□□ -0.35
CACNB3-209ENST00000548860 RHBDD3Q9Y3P4 386 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 ZNF749O43361 778 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 FARS2O95363 451 aaKnown RBP12.85□□□□□ -0.35
CACNB3-209ENST00000548860 HOXB5P09067 269 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 CT45A8P0DMV1 189 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 CT45A9P0DMV2 189 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 CDAP32320 146 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 DLX5P56178 289 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 BTG1P62324 171 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 CT45A2Q5DJT8 189 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 SLC22A18ASQ8N1D0 253 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 OR4K17Q8NGC6 315 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 LCORQ96JN0 433 aaPredicted RBP12.85□□□□□ -0.35
CACNB3-209ENST00000548860 PGLYRP3Q96LB9 341 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 POTEKPQ9BYX7 375 aa12.85□□□□□ -0.35
CACNB3-209ENST00000548860 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 OR14I1A6ND48 311 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 GABARAPH6UMI1 98 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 TNFSF12O43508 249 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 GPRIN2O60269 458 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 LUMP51884 338 aaPredicted RBP12.84□□□□□ -0.35
CACNB3-209ENST00000548860 TNK1Q13470 666 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 ZNF595Q8IYB9 648 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 ZBTB44Q8NCP5 570 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 CXorf58Q96LI9 332 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 TMEM231Q9H6L2 316 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 KLHL13Q9P2N7 655 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 TMEM82A0PJX8 343 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 SDCBPO00560 298 aaPredicted RBP12.84□□□□□ -0.35
CACNB3-209ENST00000548860 CRTAPO75718 401 aaPredicted RBP12.84□□□□□ -0.35
CACNB3-209ENST00000548860 ZNF205O95201 554 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 AKAIN1P0CW23 69 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 HLA-DOBP13765 273 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 BIDP55957 195 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 IL13RA1P78552 427 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 C9orf135Q5VTT2 229 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 PDZD9Q8IXQ8 264 aa12.84□□□□□ -0.35
CACNB3-209ENST00000548860 GVQW1Q8N7I0 195 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms