RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 CEACAM16Q2WEN9 425 aa12.01□□□□□ -0.49
PTCH1-217ENST00000548420 C11orf87Q6NUJ2 197 aa12.01□□□□□ -0.49
PTCH1-217ENST00000548420 DEFB107AQ8IZN7 70 aa12.01□□□□□ -0.49
PTCH1-217ENST00000548420 FAM86B1Q8N7N1 296 aa12.01□□□□□ -0.49
PTCH1-217ENST00000548420 RBM15BQ8NDT2 890 aaKnown RBP12.01□□□□□ -0.49
PTCH1-217ENST00000548420 C22orf15Q8WYQ4 148 aa12.01□□□□□ -0.49
PTCH1-217ENST00000548420 FBXO17Q96EF6 278 aa12.01□□□□□ -0.49
PTCH1-217ENST00000548420 SLC25A44Q96H78 314 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-217ENST00000548420 SEPHS2Q99611 448 aa12.01□□□□□ -0.49
PTCH1-217ENST00000548420 FNDC11Q9BVV2 318 aa12.01□□□□□ -0.49
PTCH1-217ENST00000548420 C1QTNF6Q9BXI9 259 aa12.01□□□□□ -0.49
PTCH1-217ENST00000548420 MRPL13Q9BYD1 178 aaKnown RBP12.01□□□□□ -0.49
PTCH1-217ENST00000548420 NMNAT1Q9HAN9 279 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-217ENST00000548420 RHCGQ9UBD6 479 aa12.01□□□□□ -0.49
PTCH1-217ENST00000548420 SAMD4AQ9UPU9 718 aaKnown RBP12.01□□□□□ -0.49
PTCH1-217ENST00000548420 HIF3AQ9Y2N7 669 aa12.01□□□□□ -0.49
PTCH1-217ENST00000548420 HYDINQ4G0P3 5121 aa12□□□□□ -0.49
PTCH1-217ENST00000548420 A0A1W2PRQ8 180 aa12□□□□□ -0.49
PTCH1-217ENST00000548420 NPIPB13A6NJU9 1138 aa12□□□□□ -0.49
PTCH1-217ENST00000548420 B2RBV5 119 aa12□□□□□ -0.49
PTCH1-217ENST00000548420 NPIPB4C9JG80 1138 aa12□□□□□ -0.49
PTCH1-217ENST00000548420 M0R3G1 203 aa12□□□□□ -0.49
PTCH1-217ENST00000548420 PIP5K1CO60331 668 aa12□□□□□ -0.49
PTCH1-217ENST00000548420 IGLV1-44P01699 117 aa12□□□□□ -0.49
PTCH1-217ENST00000548420 UMPSP11172 480 aa12□□□□□ -0.49
PTCH1-217ENST00000548420 RHCEP18577 417 aa12□□□□□ -0.49
PTCH1-217ENST00000548420 TCN1P20061 433 aaPredicted RBP12□□□□□ -0.49
PTCH1-217ENST00000548420 MAKP20794 623 aa12□□□□□ -0.49
PTCH1-217ENST00000548420 APOBEC3AP31941 199 aaPredicted RBP12□□□□□ -0.49
PTCH1-217ENST00000548420 MSX2P35548 267 aaPredicted RBP12□□□□□ -0.49
PTCH1-217ENST00000548420 AQP2P41181 271 aa12□□□□□ -0.49
PTCH1-217ENST00000548420 BIDP55957 195 aa12□□□□□ -0.49
PTCH1-217ENST00000548420 DGCR6Q14129 220 aa12□□□□□ -0.49
PTCH1-217ENST00000548420 LAPTM4AQ15012 233 aa12□□□□□ -0.49
PTCH1-217ENST00000548420 CARD17Q5XLA6 110 aa12□□□□□ -0.49
PTCH1-217ENST00000548420 LRFN4Q6PJG9 635 aa12□□□□□ -0.49
PTCH1-217ENST00000548420 NANOGNBQ7Z5D8 188 aa12□□□□□ -0.49
PTCH1-217ENST00000548420 CCDC36Q8IYA8 594 aa12□□□□□ -0.49
PTCH1-217ENST00000548420 ACOT11Q8WXI4 607 aaPredicted RBP12□□□□□ -0.49
PTCH1-217ENST00000548420 BPIFA2Q96DR5 249 aa12□□□□□ -0.49
PTCH1-217ENST00000548420 PYURFQ96I23 114 aa12□□□□□ -0.49
PTCH1-217ENST00000548420 DHRS1Q96LJ7 313 aa12□□□□□ -0.49
PTCH1-217ENST00000548420 MOV10Q9HCE1 1003 aaKnown RBP12□□□□□ -0.49
PTCH1-217ENST00000548420 B3GNT2Q9NY97 397 aa12□□□□□ -0.49
PTCH1-217ENST00000548420 GLTPQ9NZD2 209 aa12□□□□□ -0.49
PTCH1-217ENST00000548420 MAGEL2Q9UJ55 1249 aa12□□□□□ -0.49
PTCH1-217ENST00000548420 ATP23Q9Y6H3 246 aa12□□□□□ -0.49
PTCH1-217ENST00000548420 NOTCH3Q9UM47 2321 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 A0A096LPE4 126 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 A0A1W2PPZ6 126 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 CENPBD1B2RD01 187 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 M0R1B8 84 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 ARPC2O15144 300 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 GMNNO75496 209 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 BCL10O95999 233 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 IGKV3-15P01624 115 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 PGA4P0DJD7 388 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 PGA3P0DJD8 388 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 IFI30P13284 250 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 ADRA2CP18825 462 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 PRTN3P24158 256 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 CSNK1A1P48729 337 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 ZNF133P52736 654 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-217ENST00000548420 RIN1Q13671 783 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 TUSC1Q2TAM9 212 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 ANKDD1AQ495B1 522 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 ARMC4Q5T2S8 1044 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 FAHD2BQ6P2I3 314 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-217ENST00000548420 TBPL2Q6SJ96 375 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 KLHL24Q6TFL4 600 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 CCBE1Q6UXH8 406 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-217ENST00000548420 TMPRSS11FQ6ZWK6 438 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 MBOAT2Q6ZWT7 520 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 NRMQ8IXM6 262 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 ARHGAP24Q8N264 748 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 LRRC75AQ8NAA5 344 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 MOSPD2Q8NHP6 518 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 SLC7A13Q8TCU3 470 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 FAHD2AQ96GK7 314 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 VRK1Q99986 396 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-217ENST00000548420 FUZQ9BT04 418 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 B3GAT2Q9NPZ5 323 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 GRIP1Q9Y3R0 1128 aa11.99□□□□□ -0.49
PTCH1-217ENST00000548420 DNAH9Q9NYC9 4486 aa11.98□□□□□ -0.49
PTCH1-217ENST00000548420 IGHV1-18A0A0C4DH31 117 aa11.98□□□□□ -0.49
PTCH1-217ENST00000548420 A0A1W2PRG6 482 aa11.98□□□□□ -0.49
PTCH1-217ENST00000548420 ZNF503-AS2A6NEH8 195 aa11.98□□□□□ -0.49
PTCH1-217ENST00000548420 G3V4G9 280 aa11.98□□□□□ -0.49
PTCH1-217ENST00000548420 SERPINI2O75830 405 aa11.98□□□□□ -0.49
PTCH1-217ENST00000548420 F13BP05160 661 aa11.98□□□□□ -0.49
PTCH1-217ENST00000548420 CBR1P16152 277 aa11.98□□□□□ -0.49
PTCH1-217ENST00000548420 CALB2P22676 271 aa11.98□□□□□ -0.49
PTCH1-217ENST00000548420 UBE2NP61088 152 aaKnown RBP11.98□□□□□ -0.49
PTCH1-217ENST00000548420 LEG1Q6P5S2 330 aa11.98□□□□□ -0.49
PTCH1-217ENST00000548420 CYP4Z1Q86W10 505 aa11.98□□□□□ -0.49
PTCH1-217ENST00000548420 OR6N1Q8NGY5 312 aa11.98□□□□□ -0.49
PTCH1-217ENST00000548420 ASB10Q8WXI3 467 aa11.98□□□□□ -0.49
PTCH1-217ENST00000548420 ZNF566Q969W8 418 aa11.98□□□□□ -0.49
PTCH1-217ENST00000548420 NMD3Q96D46 503 aaKnown RBP11.98□□□□□ -0.49
PTCH1-217ENST00000548420 ZNF75AQ96N20 296 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms