RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 IGLV7-46A0A075B6I9 117 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 A0A087X002 238 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 DHRS7CA6NNS2 312 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 H7C0C1 242 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 DCTN6O00399 190 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 SLC17A2O00624 439 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 MBTPS2O43462 519 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 IDH3BO43837 385 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 NOL4O94818 638 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 KRT16P08779 473 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 ZSCAN5DPP0CG00 497 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 TRIM49P0CI25 452 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 TRIM49CP0CI26 452 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 NR2C1P13056 603 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 DEKP35659 375 aaKnown RBP3.37□□□□□ -1.87
SCAF11-210ENST00000547654 TNFSF9P41273 254 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 BIDP55957 195 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 RPL32P62910 135 aaKnown RBP3.37□□□□□ -1.87
SCAF11-210ENST00000547654 ADARB1P78563 741 aaKnown RBP3.37□□□□□ -1.87
SCAF11-210ENST00000547654 CCDC173Q0VFZ6 552 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 VAMP3Q15836 100 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 PTPN20Q4JDL3 420 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 TRIM40Q6P9F5 258 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 Q6ZN92 141 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 TIPARPQ7Z3E1 657 aaKnown RBP3.37□□□□□ -1.87
SCAF11-210ENST00000547654 SH2D6Q7Z4S9 175 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 ZNF547Q8IVP9 402 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 C9orf40Q8IXQ3 194 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 TRAM1L1Q8N609 369 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 ZNF564Q8TBZ8 553 aaPredicted RBP3.37□□□□□ -1.87
SCAF11-210ENST00000547654 CCDC12Q8WUD4 166 aaPredicted RBP3.37□□□□□ -1.87
SCAF11-210ENST00000547654 ECHDC3Q96DC8 303 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 PAGE5Q96GU1 130 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 SLC45A3Q96JT2 553 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 MS4A4EQ96PG1 132 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 RBM4BQ9BQ04 359 aaKnown RBP3.37□□□□□ -1.87
SCAF11-210ENST00000547654 ACBD6Q9BR61 282 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 HINT2Q9BX68 163 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 PRRG3Q9BZD7 231 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 ZYG11BQ9C0D3 744 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 RAB1BQ9H0U4 201 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 GBA3Q9H227 469 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 NTN4Q9HB63 628 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 FOLH1BQ9HBA9 442 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 BEX1Q9HBH7 125 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 CSNK1G1Q9HCP0 422 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 RETNQ9HD89 108 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 IL26Q9NPH9 171 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 KCNIP1Q9NZI2 227 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 CCDC59Q9P031 241 aaKnown RBP3.37□□□□□ -1.87
SCAF11-210ENST00000547654 ADAM22Q9P0K1 906 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 B4GALT7Q9UBV7 327 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 CACNG5Q9UF02 275 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 MMP17Q9ULZ9 603 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 C15orf41Q9Y2V0 281 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 RBMX2Q9Y388 322 aaKnown RBP3.37□□□□□ -1.87
SCAF11-210ENST00000547654 EYSQ5T1H1 3165 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 NOTCH2Q04721 2471 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 RGPD8O14715 1765 aaPredicted RBP3.37□□□□□ -1.87
SCAF11-210ENST00000547654 CDHR2Q9BYE9 1310 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 LAMA3Q16787 3333 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 IQGAP3Q86VI3 1631 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 TRIOBPQ9H2D6 2365 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 ALS2Q96Q42 1657 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 CASP8AP2Q9UKL3 1982 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 FER1L5A0AVI2 2057 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 GOLGA8QA0A0J9YX86 632 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 ZNF705EA8MWA4 302 aaPredicted RBP3.36□□□□□ -1.87
SCAF11-210ENST00000547654 A8MXK9 166 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 ZNF99A8MXY4 864 aaPredicted RBP3.36□□□□□ -1.87
SCAF11-210ENST00000547654 GPAA1O43292 621 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 EIF4E2O60573 245 aaKnown RBP3.36□□□□□ -1.87
SCAF11-210ENST00000547654 SMC2O95347 1197 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 SLC2A10O95528 541 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 CLIC3O95833 236 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 RENP00797 406 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 IGLV1-44P01699 117 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 DCNP07585 359 aaKnown RBP3.36□□□□□ -1.87
SCAF11-210ENST00000547654 NPR2P20594 1047 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 VDAC1P21796 283 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 LCN1P31025 176 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 CFHR2P36980 270 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 GPR1P46091 355 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 TFPI2P48307 235 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 GSK3BP49841 420 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 CSRP3P50461 194 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 SSR4P51571 173 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 CRISP1P54107 249 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 GPX6P59796 221 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 PAX2Q02962 417 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 SERTAD2Q14140 314 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 ZNF506Q5JVG8 444 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 MARCH8Q5T0T0 291 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 GPRC6AQ5T6X5 926 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 OR5M10Q6IEU7 315 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 ANKRD26P1Q6NSI1 321 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 UFSP1Q6NVU6 142 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 COPS6Q7L5N1 327 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 FAM122BQ7Z309 247 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 SLC26A11Q86WA9 606 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms