RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 TMPRSS11FQ6ZWK6 438 aa16.02■□□□□ 0.16
CHMP1A-203ENST00000547614 MBOAT2Q6ZWT7 520 aa16.02■□□□□ 0.16
CHMP1A-203ENST00000547614 LRP11Q86VZ4 500 aa16.02■□□□□ 0.16
CHMP1A-203ENST00000547614 CYP4Z1Q86W10 505 aa16.02■□□□□ 0.16
CHMP1A-203ENST00000547614 LRRC18Q8N456 261 aa16.02■□□□□ 0.16
CHMP1A-203ENST00000547614 FAM156AQ8NDB6 213 aa16.02■□□□□ 0.16
CHMP1A-203ENST00000547614 OR51A7Q8NH64 312 aa16.02■□□□□ 0.16
CHMP1A-203ENST00000547614 FAM162AQ96A26 154 aa16.02■□□□□ 0.16
CHMP1A-203ENST00000547614 NABP1Q96AH0 204 aa16.02■□□□□ 0.16
CHMP1A-203ENST00000547614 SYT3Q9BQG1 590 aa16.02■□□□□ 0.16
CHMP1A-203ENST00000547614 NMNAT1Q9HAN9 279 aaPredicted RBP16.02■□□□□ 0.16
CHMP1A-203ENST00000547614 DUSP13Q9UII6 198 aa16.02■□□□□ 0.16
CHMP1A-203ENST00000547614 RPS6KA6Q9UK32 745 aa16.02■□□□□ 0.16
CHMP1A-203ENST00000547614 ENPP4Q9Y6X5 453 aa16.02■□□□□ 0.16
CHMP1A-203ENST00000547614 ANK3Q12955 4377 aaKnown RBP16.01■□□□□ 0.15
CHMP1A-203ENST00000547614 SNX3O60493 162 aa16.01■□□□□ 0.15
CHMP1A-203ENST00000547614 LMX1BO60663 402 aa16.01■□□□□ 0.15
CHMP1A-203ENST00000547614 TACSTD2P09758 323 aa16.01■□□□□ 0.15
CHMP1A-203ENST00000547614 FAM157CP0CG43 387 aa16.01■□□□□ 0.15
CHMP1A-203ENST00000547614 ZNF250P15622 560 aa16.01■□□□□ 0.15
CHMP1A-203ENST00000547614 CDAP32320 146 aa16.01■□□□□ 0.15
CHMP1A-203ENST00000547614 UCP2P55851 309 aa16.01■□□□□ 0.15
CHMP1A-203ENST00000547614 SELENOVP59797 346 aa16.01■□□□□ 0.15
CHMP1A-203ENST00000547614 FMODQ06828 376 aa16.01■□□□□ 0.15
CHMP1A-203ENST00000547614 TOP3AQ13472 1001 aaPredicted RBP16.01■□□□□ 0.15
CHMP1A-203ENST00000547614 RIN1Q13671 783 aa16.01■□□□□ 0.15
CHMP1A-203ENST00000547614 FAM27BQ5VT28 67 aa16.01■□□□□ 0.15
CHMP1A-203ENST00000547614 FAM166AQ6J272 317 aa16.01■□□□□ 0.15
CHMP1A-203ENST00000547614 RRM2BQ7LG56 351 aa16.01■□□□□ 0.15
CHMP1A-203ENST00000547614 PAQR4Q8N4S7 273 aaPredicted RBP16.01■□□□□ 0.15
CHMP1A-203ENST00000547614 ZNF519Q8TB69 540 aa16.01■□□□□ 0.15
CHMP1A-203ENST00000547614 MSI2Q96DH6 328 aaKnown RBP16.01■□□□□ 0.15
CHMP1A-203ENST00000547614 MDFIQ99750 246 aa16.01■□□□□ 0.15
CHMP1A-203ENST00000547614 BCL2L14Q9BZR8 327 aa16.01■□□□□ 0.15
CHMP1A-203ENST00000547614 TPK1Q9H3S4 243 aa16.01■□□□□ 0.15
CHMP1A-203ENST00000547614 CCNB1IP1Q9NPC3 277 aa16.01■□□□□ 0.15
CHMP1A-203ENST00000547614 SPAG4Q9NPE6 437 aa16.01■□□□□ 0.15
CHMP1A-203ENST00000547614 LPAR3Q9UBY5 353 aa16.01■□□□□ 0.15
CHMP1A-203ENST00000547614 GPR160Q9UJ42 338 aa16.01■□□□□ 0.15
CHMP1A-203ENST00000547614 MALRD1Q5VYJ5 2156 aa16.01■□□□□ 0.15
CHMP1A-203ENST00000547614 IGLV3-9A0A075B6K5 115 aa16■□□□□ 0.15
CHMP1A-203ENST00000547614 TRAV27A0A087WT01 109 aa16■□□□□ 0.15
CHMP1A-203ENST00000547614 IGKV1D-43A0A0B4J1Z2 117 aa16■□□□□ 0.15
CHMP1A-203ENST00000547614 LOC100289279A0A1B0GTE1 492 aa16■□□□□ 0.15
CHMP1A-203ENST00000547614 FAM157BP0CG42 384 aa16■□□□□ 0.15
CHMP1A-203ENST00000547614 CCL2P13500 99 aa16■□□□□ 0.15
CHMP1A-203ENST00000547614 NCK1P16333 377 aa16■□□□□ 0.15
CHMP1A-203ENST00000547614 ZNF16P17020 682 aaPredicted RBP16■□□□□ 0.15
CHMP1A-203ENST00000547614 APLNRP35414 380 aa16■□□□□ 0.15
CHMP1A-203ENST00000547614 GUCA1AP43080 201 aaPredicted RBP16■□□□□ 0.15
CHMP1A-203ENST00000547614 ALDH3B1P43353 468 aa16■□□□□ 0.15
CHMP1A-203ENST00000547614 HSF2Q03933 536 aa16■□□□□ 0.15
CHMP1A-203ENST00000547614 SGCAQ16586 387 aa16■□□□□ 0.15
CHMP1A-203ENST00000547614 PABPC1L2AQ5JQF8 200 aa16■□□□□ 0.15
CHMP1A-203ENST00000547614 TBPL2Q6SJ96 375 aa16■□□□□ 0.15
CHMP1A-203ENST00000547614 TSEN54Q7Z6J9 526 aaKnown RBP16■□□□□ 0.15
CHMP1A-203ENST00000547614 ARIH2OSQ8N7S6 290 aa16■□□□□ 0.15
CHMP1A-203ENST00000547614 CPEB3Q8NE35 698 aaKnown RBP16■□□□□ 0.15
CHMP1A-203ENST00000547614 C11orf40Q8WZ69 217 aa16■□□□□ 0.15
CHMP1A-203ENST00000547614 NSMAFQ92636 917 aa16■□□□□ 0.15
CHMP1A-203ENST00000547614 HPS1Q92902 700 aa16■□□□□ 0.15
CHMP1A-203ENST00000547614 BEX2Q9BXY8 128 aa16■□□□□ 0.15
CHMP1A-203ENST00000547614 NSRP1Q9H0G5 558 aaKnown RBP16■□□□□ 0.15
CHMP1A-203ENST00000547614 MYEF2Q9P2K5 600 aaKnown RBP16■□□□□ 0.15
CHMP1A-203ENST00000547614 TMEM5Q9Y2B1 443 aa16■□□□□ 0.15
CHMP1A-203ENST00000547614 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16■□□□□ 0.156e-9■■■□□ 14.9
CHMP1A-203ENST00000547614 A0A1W2PRQ8 180 aa15.99■□□□□ 0.15
CHMP1A-203ENST00000547614 LILRA1O75019 489 aa15.99■□□□□ 0.15
CHMP1A-203ENST00000547614 ZNF32P17041 273 aa15.99■□□□□ 0.15
CHMP1A-203ENST00000547614 APEX1P27695 318 aaKnown RBP15.99■□□□□ 0.15
CHMP1A-203ENST00000547614 CHN2P52757 468 aa15.99■□□□□ 0.15
CHMP1A-203ENST00000547614 KLF3P57682 345 aaPredicted RBP15.99■□□□□ 0.15
CHMP1A-203ENST00000547614 MRPS11P82912 194 aaKnown RBP15.99■□□□□ 0.15
CHMP1A-203ENST00000547614 DGCR6Q14129 220 aa15.99■□□□□ 0.15
CHMP1A-203ENST00000547614 ZBED5Q49AG3 693 aa15.99■□□□□ 0.15
CHMP1A-203ENST00000547614 GLYATQ6IB77 296 aa15.99■□□□□ 0.15
CHMP1A-203ENST00000547614 FOXL2NBQ6ZUU3 175 aa15.99■□□□□ 0.15
CHMP1A-203ENST00000547614 CPLX4Q7Z7G2 160 aa15.99■□□□□ 0.15
CHMP1A-203ENST00000547614 IGFN1Q86VF2 1251 aa15.99■□□□□ 0.15
CHMP1A-203ENST00000547614 SYNPRQ8TBG9 265 aa15.99■□□□□ 0.15
CHMP1A-203ENST00000547614 SLC7A13Q8TCU3 470 aa15.99■□□□□ 0.15
CHMP1A-203ENST00000547614 TSPAN32Q96QS1 320 aa15.99■□□□□ 0.15
CHMP1A-203ENST00000547614 DCAF13Q9NV06 445 aaKnown RBP15.99■□□□□ 0.15
CHMP1A-203ENST00000547614 SLCO1C1Q9NYB5 712 aa15.99■□□□□ 0.15
CHMP1A-203ENST00000547614 KCNS2Q9ULS6 477 aa15.99■□□□□ 0.15
CHMP1A-203ENST00000547614 FZR1Q9UM11 496 aa15.99■□□□□ 0.15
CHMP1A-203ENST00000547614 SAMD4AQ9UPU9 718 aaKnown RBP15.99■□□□□ 0.15
CHMP1A-203ENST00000547614 FAM32AQ9Y421 112 aaKnown RBP15.99■□□□□ 0.15
CHMP1A-203ENST00000547614 COL6A5A8TX70 2615 aa15.99■□□□□ 0.15
CHMP1A-203ENST00000547614 A0A1W2PPW3 197 aa15.98■□□□□ 0.15
CHMP1A-203ENST00000547614 CDC42EP2O14613 210 aa15.98■□□□□ 0.15
CHMP1A-203ENST00000547614 AHCYL1O43865 530 aa15.98■□□□□ 0.15
CHMP1A-203ENST00000547614 GMNNO75496 209 aa15.98■□□□□ 0.15
CHMP1A-203ENST00000547614 LCKP06239 509 aa15.98■□□□□ 0.15
CHMP1A-203ENST00000547614 CD14P08571 375 aa15.98■□□□□ 0.15
CHMP1A-203ENST00000547614 CST2P09228 141 aa15.98■□□□□ 0.15
CHMP1A-203ENST00000547614 RHCEP18577 417 aa15.98■□□□□ 0.15
CHMP1A-203ENST00000547614 DRD4P21917 467 aa15.98■□□□□ 0.15
CHMP1A-203ENST00000547614 STOMP27105 288 aa15.98■□□□□ 0.15
CHMP1A-203ENST00000547614 PCBD1P61457 104 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms