RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 RCN3Q96D15 328 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 BPIFA2Q96DR5 249 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 TXNIPQ9H3M7 391 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 NARFLQ9H6Q4 476 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 CDH20Q9HBT6 801 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 MAN2C1Q9NTJ4 1040 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 RHCGQ9UBD6 479 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 ZNF346Q9UL40 294 aaKnown RBP11.41□□□□□ -0.58
CPSF6-204ENST00000547486 HIF3AQ9Y2N7 669 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 IGLV3-9A0A075B6K5 115 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 LOC100509620A0A075B734 347 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 IQCMA0A1B0GVH7 501 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 ELOVL7A1L3X0 281 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 C17orf100A8MU93 164 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 FAM157AC9JC47 383 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 MGRN1O60291 552 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 RP2O75695 350 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 IFI30P13284 250 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 ZNF32P17041 273 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 HNF1AP20823 631 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 ACHEP22303 614 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 RAD52P43351 418 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 GPR6P46095 362 aaPredicted RBP11.4□□□□□ -0.58
CPSF6-204ENST00000547486 TMEM33P57088 247 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 CCL8P80075 99 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 PLP2Q04941 152 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 ST3GAL3Q11203 375 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 SGCAQ16586 387 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 NKPD1Q17RQ9 610 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 ALG10Q5BKT4 473 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 TMEM255AQ5JRV8 349 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 SLC25A47Q6Q0C1 308 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 IGFN1Q86VF2 1251 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 SLC15A3Q8IY34 581 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 AKR7LQ8NHP1 331 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 C11orf40Q8WZ69 217 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 PRRC1Q96M27 445 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 C1orf198Q9H425 327 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 HINT3Q9NQE9 182 aaKnown RBP11.4□□□□□ -0.58
CPSF6-204ENST00000547486 MRGBPQ9NV56 204 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 TREM2Q9NZC2 230 aa11.4□□□□□ -0.58
CPSF6-204ENST00000547486 NPIPB13A6NJU9 1138 aa11.39□□□□□ -0.59
CPSF6-204ENST00000547486 NPIPB4C9JG80 1138 aa11.39□□□□□ -0.59
CPSF6-204ENST00000547486 PPIHO43447 177 aaKnown RBP11.39□□□□□ -0.59
CPSF6-204ENST00000547486 CDC14BO60729 498 aa11.39□□□□□ -0.59
CPSF6-204ENST00000547486 PTHP01270 115 aa11.39□□□□□ -0.59
CPSF6-204ENST00000547486 SCG5P05408 212 aa11.39□□□□□ -0.59
CPSF6-204ENST00000547486 CCNOP22674 350 aa11.39□□□□□ -0.59
CPSF6-204ENST00000547486 STOMP27105 288 aa11.39□□□□□ -0.59
CPSF6-204ENST00000547486 WNT5AP41221 380 aa11.39□□□□□ -0.59
CPSF6-204ENST00000547486 DVL1P1P54792 670 aaPredicted RBP11.39□□□□□ -0.59
CPSF6-204ENST00000547486 KLF3P57682 345 aaPredicted RBP11.39□□□□□ -0.59
CPSF6-204ENST00000547486 LMO4P61968 165 aa11.39□□□□□ -0.59
CPSF6-204ENST00000547486 MRPS11P82912 194 aaKnown RBP11.39□□□□□ -0.59
CPSF6-204ENST00000547486 PSG4Q00888 419 aa11.39□□□□□ -0.59
CPSF6-204ENST00000547486 LIPEQ05469 1076 aa11.39□□□□□ -0.59
CPSF6-204ENST00000547486 TOP3AQ13472 1001 aaPredicted RBP11.39□□□□□ -0.59
CPSF6-204ENST00000547486 TBPL2Q6SJ96 375 aa11.39□□□□□ -0.59
CPSF6-204ENST00000547486 NRMQ8IXM6 262 aa11.39□□□□□ -0.59
CPSF6-204ENST00000547486 ZNF101Q8IZC7 436 aa11.39□□□□□ -0.59
CPSF6-204ENST00000547486 ICA1LQ8NDH6 482 aa11.39□□□□□ -0.59
CPSF6-204ENST00000547486 OR1J2Q8NGS2 313 aa11.39□□□□□ -0.59
CPSF6-204ENST00000547486 OR1J1Q8NGS3 322 aa11.39□□□□□ -0.59
CPSF6-204ENST00000547486 OR51A7Q8NH64 312 aa11.39□□□□□ -0.59
CPSF6-204ENST00000547486 POM121L2Q96KW2 1035 aa11.39□□□□□ -0.59
CPSF6-204ENST00000547486 C19orf24Q9BVV8 132 aa11.39□□□□□ -0.59
CPSF6-204ENST00000547486 BCL2L14Q9BZR8 327 aa11.39□□□□□ -0.59
CPSF6-204ENST00000547486 SMURF2Q9HAU4 748 aa11.39□□□□□ -0.59
CPSF6-204ENST00000547486 CAPN7Q9Y6W3 813 aa11.39□□□□□ -0.59
CPSF6-204ENST00000547486 TRAV27A0A087WT01 109 aa11.38□□□□□ -0.59
CPSF6-204ENST00000547486 B4DSR2 109 aa11.38□□□□□ -0.59
CPSF6-204ENST00000547486 IGHMP01871 453 aa11.38□□□□□ -0.59
CPSF6-204ENST00000547486 SAGP10523 405 aaPredicted RBP11.38□□□□□ -0.59
CPSF6-204ENST00000547486 ZNF26P17031 533 aaPredicted RBP11.38□□□□□ -0.59
CPSF6-204ENST00000547486 LAP3P28838 519 aa11.38□□□□□ -0.59
CPSF6-204ENST00000547486 APLNRP35414 380 aa11.38□□□□□ -0.59
CPSF6-204ENST00000547486 SELENOVP59797 346 aa11.38□□□□□ -0.59
CPSF6-204ENST00000547486 CTXN1P60606 82 aa11.38□□□□□ -0.59
CPSF6-204ENST00000547486 RPL27P61353 136 aaKnown RBP11.38□□□□□ -0.59
CPSF6-204ENST00000547486 ERVK-25P63136 954 aa11.38□□□□□ -0.59
CPSF6-204ENST00000547486 HSF2Q03933 536 aa11.38□□□□□ -0.59
CPSF6-204ENST00000547486 GLO1Q04760 184 aa11.38□□□□□ -0.59
CPSF6-204ENST00000547486 PRKCDQ05655 676 aa11.38□□□□□ -0.59
CPSF6-204ENST00000547486 CD47Q08722 323 aa11.38□□□□□ -0.59
CPSF6-204ENST00000547486 SPATA46Q5T0L3 261 aa11.38□□□□□ -0.59
CPSF6-204ENST00000547486 FAM27BQ5VT28 67 aa11.38□□□□□ -0.59
CPSF6-204ENST00000547486 C8orf82Q6P1X6 216 aaPredicted RBP11.38□□□□□ -0.59
CPSF6-204ENST00000547486 TMEM154Q6P9G4 183 aa11.38□□□□□ -0.59
CPSF6-204ENST00000547486 HDDC2Q7Z4H3 204 aa11.38□□□□□ -0.59
CPSF6-204ENST00000547486 TSEN54Q7Z6J9 526 aaKnown RBP11.38□□□□□ -0.59
CPSF6-204ENST00000547486 RP9Q8TA86 221 aaKnown RBP11.38□□□□□ -0.59
CPSF6-204ENST00000547486 ALG12Q9BV10 488 aa11.38□□□□□ -0.59
CPSF6-204ENST00000547486 FNDC11Q9BVV2 318 aa11.38□□□□□ -0.59
CPSF6-204ENST00000547486 WNT5BQ9H1J7 359 aa11.38□□□□□ -0.59
CPSF6-204ENST00000547486 LRMDAQ9H2I8 198 aa11.38□□□□□ -0.59
CPSF6-204ENST00000547486 KCNN2Q9H2S1 579 aa11.38□□□□□ -0.59
CPSF6-204ENST00000547486 CCDC134Q9H6E4 229 aa11.38□□□□□ -0.59
CPSF6-204ENST00000547486 LPAR2Q9HBW0 351 aa11.38□□□□□ -0.59
CPSF6-204ENST00000547486 CCNB1IP1Q9NPC3 277 aa11.38□□□□□ -0.59
CPSF6-204ENST00000547486 SLCO1C1Q9NYB5 712 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms