RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 TMEM53Q6P2H8 277 aa14.64□□□□□ -0.07
CCDC38-203ENST00000546803 SLC16A14Q7RTX9 510 aa14.64□□□□□ -0.07
CCDC38-203ENST00000546803 PIAS4Q8N2W9 510 aaPredicted RBP14.64□□□□□ -0.07
CCDC38-203ENST00000546803 OR52E2Q8NGJ4 325 aa14.64□□□□□ -0.07
CCDC38-203ENST00000546803 NABP1Q96AH0 204 aa14.64□□□□□ -0.07
CCDC38-203ENST00000546803 NMNAT3Q96T66 252 aa14.64□□□□□ -0.07
CCDC38-203ENST00000546803 SH3GL3Q99963 347 aa14.64□□□□□ -0.07
CCDC38-203ENST00000546803 KCNS3Q9BQ31 491 aa14.64□□□□□ -0.07
CCDC38-203ENST00000546803 NUAK2Q9H093 628 aa14.64□□□□□ -0.07
CCDC38-203ENST00000546803 SEC61A2Q9H9S3 476 aa14.64□□□□□ -0.07
CCDC38-203ENST00000546803 PAPOLBQ9NRJ5 636 aaKnown RBP14.64□□□□□ -0.07
CCDC38-203ENST00000546803 KIF17Q9P2E2 1029 aa14.64□□□□□ -0.07
CCDC38-203ENST00000546803 UTP20O75691 2785 aaKnown RBP14.64□□□□□ -0.07
CCDC38-203ENST00000546803 A0A1W2PPL8 197 aa14.63□□□□□ -0.07
CCDC38-203ENST00000546803 HS3ST1O14792 307 aa14.63□□□□□ -0.07
CCDC38-203ENST00000546803 IFNGP01579 166 aa14.63□□□□□ -0.07
CCDC38-203ENST00000546803 CRYAAP02489 173 aa14.63□□□□□ -0.07
CCDC38-203ENST00000546803 CECR9P0C854 216 aa14.63□□□□□ -0.07
CCDC38-203ENST00000546803 MSR1P21757 451 aa14.63□□□□□ -0.07
CCDC38-203ENST00000546803 LAP3P28838 519 aa14.63□□□□□ -0.07
CCDC38-203ENST00000546803 GIPRP48546 466 aa14.63□□□□□ -0.07
CCDC38-203ENST00000546803 PTDSS1P48651 473 aaKnown RBP14.63□□□□□ -0.07
CCDC38-203ENST00000546803 DAPP51397 102 aa14.63□□□□□ -0.07
CCDC38-203ENST00000546803 IDH3GP51553 393 aaPredicted RBP14.63□□□□□ -0.07
CCDC38-203ENST00000546803 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.63□□□□□ -0.07
CCDC38-203ENST00000546803 ZNF672Q499Z4 452 aaPredicted RBP14.63□□□□□ -0.07
CCDC38-203ENST00000546803 SLC27A4Q6P1M0 643 aa14.63□□□□□ -0.07
CCDC38-203ENST00000546803 SLC22A25Q6T423 547 aa14.63□□□□□ -0.07
CCDC38-203ENST00000546803 C20orf204Q6ZNR8 217 aa14.63□□□□□ -0.07
CCDC38-203ENST00000546803 GLB1L2Q8IW92 636 aa14.63□□□□□ -0.07
CCDC38-203ENST00000546803 PARP8Q8N3A8 854 aa14.63□□□□□ -0.07
CCDC38-203ENST00000546803 NPEPL1Q8NDH3 523 aa14.63□□□□□ -0.07
CCDC38-203ENST00000546803 OR4Q3Q8NH05 313 aa14.63□□□□□ -0.07
CCDC38-203ENST00000546803 AKAP1Q92667 903 aaKnown RBP eCLIP14.63□□□□□ -0.07
CCDC38-203ENST00000546803 ZNF75AQ96N20 296 aa14.63□□□□□ -0.07
CCDC38-203ENST00000546803 WACQ9BTA9 647 aa14.63□□□□□ -0.07
CCDC38-203ENST00000546803 OSBPL10Q9BXB5 764 aa14.63□□□□□ -0.07
CCDC38-203ENST00000546803 GABARAPL1Q9H0R8 117 aa14.63□□□□□ -0.07
CCDC38-203ENST00000546803 POLE4Q9NR33 117 aa14.63□□□□□ -0.07
CCDC38-203ENST00000546803 KLHL21Q9UJP4 597 aa14.63□□□□□ -0.07
CCDC38-203ENST00000546803 FKBP7Q9Y680 259 aa14.63□□□□□ -0.07
CCDC38-203ENST00000546803 UNC79Q9P2D8 2635 aa14.63□□□□□ -0.07
CCDC38-203ENST00000546803 SHISA9B4DS77 424 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 CST2P09228 141 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 POU1F1P28069 291 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 GRK5P34947 590 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 PCBD1P61457 104 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 NAAAQ02083 359 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 NPRL3Q12980 569 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 ETFDHQ16134 617 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 PGGHGQ32M88 737 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 ZNF362Q5T0B9 420 aaPredicted RBP14.62□□□□□ -0.07
CCDC38-203ENST00000546803 PAMR1Q6UXH9 720 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 SYT9Q86SS6 491 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 ALPK2Q86TB3 2170 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 CDH24Q86UP0 819 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 LRRC18Q8N456 261 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 ZNF611Q8N823 705 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 SDR9C7Q8NEX9 313 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 KBTBD8Q8NFY9 601 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 NINJ1Q92982 152 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 PKP2Q99959 881 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 TEX12Q9BXU0 123 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 RACGAP1Q9H0H5 632 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 SEMA6AQ9H2E6 1030 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 RERGLQ9H628 205 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 RNF121Q9H920 327 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 UBTD1Q9HAC8 227 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 NOX3Q9HBY0 568 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 S100A14Q9HCY8 104 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 CCNB1IP1Q9NPC3 277 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 ENOPH1Q9UHY7 261 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 ST6GALNAC2Q9UJ37 374 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 B9D1Q9UPM9 204 aa14.62□□□□□ -0.07
CCDC38-203ENST00000546803 COA3Q9Y2R0 106 aaPredicted RBP14.62□□□□□ -0.07
CCDC38-203ENST00000546803 OR6C68A6NDL8 312 aa14.61□□□□□ -0.07
CCDC38-203ENST00000546803 RIIAD1A6NNX1 92 aa14.61□□□□□ -0.07
CCDC38-203ENST00000546803 C12orf71A8MTZ7 269 aa14.61□□□□□ -0.07
CCDC38-203ENST00000546803 PTHP01270 115 aa14.61□□□□□ -0.07
CCDC38-203ENST00000546803 RAF1P04049 648 aa14.61□□□□□ -0.07
CCDC38-203ENST00000546803 HMGN1P05114 100 aa14.61□□□□□ -0.07
CCDC38-203ENST00000546803 SERPINA5P05154 406 aa14.61□□□□□ -0.07
CCDC38-203ENST00000546803 PATE4P0C8F1 98 aa14.61□□□□□ -0.07
CCDC38-203ENST00000546803 LSM6P62312 80 aaKnown RBP14.61□□□□□ -0.07
CCDC38-203ENST00000546803 PLP2Q04941 152 aa14.61□□□□□ -0.07
CCDC38-203ENST00000546803 GINS1Q14691 196 aa14.61□□□□□ -0.07
CCDC38-203ENST00000546803 ZBTB46Q86UZ6 589 aa14.61□□□□□ -0.07
CCDC38-203ENST00000546803 OR6V1Q8N148 313 aa14.61□□□□□ -0.07
CCDC38-203ENST00000546803 OR2T4Q8NH00 348 aa14.61□□□□□ -0.07
CCDC38-203ENST00000546803 LILRB1Q8NHL6 650 aaPredicted RBP14.61□□□□□ -0.07
CCDC38-203ENST00000546803 FGFBP3Q8TAT2 258 aa14.61□□□□□ -0.07
CCDC38-203ENST00000546803 HTRA1Q92743 480 aa14.61□□□□□ -0.07
CCDC38-203ENST00000546803 FBXW5Q969U6 566 aa14.61□□□□□ -0.07
CCDC38-203ENST00000546803 DDOQ99489 341 aa14.61□□□□□ -0.07
CCDC38-203ENST00000546803 C1orf198Q9H425 327 aa14.61□□□□□ -0.07
CCDC38-203ENST00000546803 SRA1Q9HD15 236 aaKnown RBP14.61□□□□□ -0.07
CCDC38-203ENST00000546803 RPRD1BQ9NQG5 326 aaKnown RBP14.61□□□□□ -0.07
CCDC38-203ENST00000546803 CMC2Q9NRP2 79 aa14.61□□□□□ -0.07
CCDC38-203ENST00000546803 KRT84Q9NSB2 600 aa14.61□□□□□ -0.07
CCDC38-203ENST00000546803 POU2F3Q9UKI9 436 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms