RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 SLC2A10O95528 541 aa13.21□□□□□ -0.29
SSH1-204ENST00000546697 PTHP01270 115 aa13.21□□□□□ -0.29
SSH1-204ENST00000546697 SLC25A16P16260 332 aa13.21□□□□□ -0.29
SSH1-204ENST00000546697 CAPZA2P47755 286 aa13.21□□□□□ -0.29
SSH1-204ENST00000546697 NUDT6P53370 316 aa13.21□□□□□ -0.29
SSH1-204ENST00000546697 RPS23P62266 143 aaKnown RBP13.21□□□□□ -0.29
SSH1-204ENST00000546697 PIGFQ07326 219 aa13.21□□□□□ -0.29
SSH1-204ENST00000546697 LOXL1Q08397 574 aaPredicted RBP13.21□□□□□ -0.29
SSH1-204ENST00000546697 SNTB2Q13425 540 aaKnown RBP13.21□□□□□ -0.29
SSH1-204ENST00000546697 RAB39AQ14964 217 aa13.21□□□□□ -0.29
SSH1-204ENST00000546697 MSMPQ1L6U9 139 aa13.21□□□□□ -0.29
SSH1-204ENST00000546697 GPR139Q6DWJ6 353 aa13.21□□□□□ -0.29
SSH1-204ENST00000546697 LCN8Q6JVE9 175 aa13.21□□□□□ -0.29
SSH1-204ENST00000546697 SLC16A14Q7RTX9 510 aa13.21□□□□□ -0.29
SSH1-204ENST00000546697 SYT14Q8NB59 555 aa13.21□□□□□ -0.29
SSH1-204ENST00000546697 C10orf105Q8TEF2 133 aa13.21□□□□□ -0.29
SSH1-204ENST00000546697 FBXO17Q96EF6 278 aa13.21□□□□□ -0.29
SSH1-204ENST00000546697 SORCS2Q96PQ0 1159 aa13.21□□□□□ -0.29
SSH1-204ENST00000546697 RBP7Q96R05 134 aa13.21□□□□□ -0.29
SSH1-204ENST00000546697 SH3GL3Q99963 347 aa13.21□□□□□ -0.29
SSH1-204ENST00000546697 VSX1Q9NZR4 365 aaPredicted RBP13.21□□□□□ -0.29
SSH1-204ENST00000546697 ADAM21Q9UKJ8 722 aa13.21□□□□□ -0.29
SSH1-204ENST00000546697 IGLV3-9A0A075B6K5 115 aa13.2□□□□□ -0.3
SSH1-204ENST00000546697 IGHV4-30-2A0A087WSY4 118 aa13.2□□□□□ -0.3
SSH1-204ENST00000546697 TCRBV5S2A0A599 114 aa13.2□□□□□ -0.3
SSH1-204ENST00000546697 SSX4O60224 188 aa13.2□□□□□ -0.3
SSH1-204ENST00000546697 NDUFB2O95178 105 aa13.2□□□□□ -0.3
SSH1-204ENST00000546697 CST2P09228 141 aa13.2□□□□□ -0.3
SSH1-204ENST00000546697 TCN1P20061 433 aaPredicted RBP13.2□□□□□ -0.3
SSH1-204ENST00000546697 FPR3P25089 353 aa13.2□□□□□ -0.3
SSH1-204ENST00000546697 SDHAP31040 664 aa13.2□□□□□ -0.3
SSH1-204ENST00000546697 GPR4P46093 362 aa13.2□□□□□ -0.3
SSH1-204ENST00000546697 FMODQ06828 376 aa13.2□□□□□ -0.3
SSH1-204ENST00000546697 MESTQ5EB52 335 aa13.2□□□□□ -0.3
SSH1-204ENST00000546697 TMEM53Q6P2H8 277 aa13.2□□□□□ -0.3
SSH1-204ENST00000546697 CLEC2AQ6UVW9 174 aa13.2□□□□□ -0.3
SSH1-204ENST00000546697 RRM2BQ7LG56 351 aa13.2□□□□□ -0.3
SSH1-204ENST00000546697 ZER1Q7Z7L7 766 aa13.2□□□□□ -0.3
SSH1-204ENST00000546697 C1orf174Q8IYL3 243 aa13.2□□□□□ -0.3
SSH1-204ENST00000546697 SNX18Q96RF0 628 aa13.2□□□□□ -0.3
SSH1-204ENST00000546697 GPA33Q99795 319 aa13.2□□□□□ -0.3
SSH1-204ENST00000546697 RHNO1Q9BSD3 238 aa13.2□□□□□ -0.3
SSH1-204ENST00000546697 NDEL1Q9GZM8 345 aa13.2□□□□□ -0.3
SSH1-204ENST00000546697 MAGIXQ9H6Y5 334 aa13.2□□□□□ -0.3
SSH1-204ENST00000546697 KRCC1Q9NPI7 259 aaPredicted RBP13.2□□□□□ -0.3
SSH1-204ENST00000546697 PRPF19Q9UMS4 504 aaKnown RBP13.2□□□□□ -0.3
SSH1-204ENST00000546697 CMAHPQ9Y471 501 aa13.2□□□□□ -0.3
SSH1-204ENST00000546697 PRSS37A4D1T9 235 aa13.19□□□□□ -0.3
SSH1-204ENST00000546697 B2RBV5 119 aa13.19□□□□□ -0.3
SSH1-204ENST00000546697 RNF223E7ERA6 249 aa13.19□□□□□ -0.3
SSH1-204ENST00000546697 hCG_2039718K7EN88 272 aa13.19□□□□□ -0.3
SSH1-204ENST00000546697 IMPA2O14732 288 aa13.19□□□□□ -0.3
SSH1-204ENST00000546697 ARPC3O15145 178 aa13.19□□□□□ -0.3
SSH1-204ENST00000546697 KRT36O76013 467 aa13.19□□□□□ -0.3
SSH1-204ENST00000546697 FABP3P05413 133 aa13.19□□□□□ -0.3
SSH1-204ENST00000546697 PATE4P0C8F1 98 aa13.19□□□□□ -0.3
SSH1-204ENST00000546697 ZNF250P15622 560 aa13.19□□□□□ -0.3
SSH1-204ENST00000546697 GIFP27352 417 aa13.19□□□□□ -0.3
SSH1-204ENST00000546697 GSSP48637 474 aa13.19□□□□□ -0.3
SSH1-204ENST00000546697 MYBPC1Q00872 1141 aa13.19□□□□□ -0.3
SSH1-204ENST00000546697 CD47Q08722 323 aa13.19□□□□□ -0.3
SSH1-204ENST00000546697 TRIM25Q14258 630 aaKnown RBP13.19□□□□□ -0.3
SSH1-204ENST00000546697 C1orf94Q6P1W5 598 aa13.19□□□□□ -0.3
SSH1-204ENST00000546697 THSD4Q6ZMP0 1018 aa13.19□□□□□ -0.3
SSH1-204ENST00000546697 DPY19L2P2Q6ZN68 376 aa13.19□□□□□ -0.3
SSH1-204ENST00000546697 ADCK1Q86TW2 530 aa13.19□□□□□ -0.3
SSH1-204ENST00000546697 ZNF525Q8N782 197 aa13.19□□□□□ -0.3
SSH1-204ENST00000546697 SLC30A7Q8NEW0 376 aa13.19□□□□□ -0.3
SSH1-204ENST00000546697 OR1J2Q8NGS2 313 aa13.19□□□□□ -0.3
SSH1-204ENST00000546697 NEU4Q8WWR8 484 aaPredicted RBP13.19□□□□□ -0.3
SSH1-204ENST00000546697 FAM46AQ96IP4 442 aaKnown RBP13.19□□□□□ -0.3
SSH1-204ENST00000546697 RSRC1Q96IZ7 334 aaKnown RBP13.19□□□□□ -0.3
SSH1-204ENST00000546697 POM121L2Q96KW2 1035 aa13.19□□□□□ -0.3
SSH1-204ENST00000546697 TRIM15Q9C019 465 aa13.19□□□□□ -0.3
SSH1-204ENST00000546697 ADAM18Q9Y3Q7 739 aa13.19□□□□□ -0.3
SSH1-204ENST00000546697 FKBP7Q9Y680 259 aa13.19□□□□□ -0.3
SSH1-204ENST00000546697 ABCA1O95477 2261 aa13.19□□□□□ -0.3
SSH1-204ENST00000546697 TEX13CA0A0J9YWL9 993 aa13.18□□□□□ -0.3
SSH1-204ENST00000546697 SYNGR3O43761 229 aa13.18□□□□□ -0.3
SSH1-204ENST00000546697 GPRIN2O60269 458 aa13.18□□□□□ -0.3
SSH1-204ENST00000546697 DIRAS1O95057 198 aa13.18□□□□□ -0.3
SSH1-204ENST00000546697 GADD45GO95257 159 aa13.18□□□□□ -0.3
SSH1-204ENST00000546697 COX5BP10606 129 aa13.18□□□□□ -0.3
SSH1-204ENST00000546697 ATP6V1B2P21281 511 aa13.18□□□□□ -0.3
SSH1-204ENST00000546697 MSX2P35548 267 aaPredicted RBP13.18□□□□□ -0.3
SSH1-204ENST00000546697 ENDOGQ14249 297 aaKnown RBP13.18□□□□□ -0.3
SSH1-204ENST00000546697 KCNMB1Q16558 191 aa13.18□□□□□ -0.3
SSH1-204ENST00000546697 FGD3Q5JSP0 725 aa13.18□□□□□ -0.3
SSH1-204ENST00000546697 ZNF770Q6IQ21 691 aaPredicted RBP13.18□□□□□ -0.3
SSH1-204ENST00000546697 KRT80Q6KB66 452 aa13.18□□□□□ -0.3
SSH1-204ENST00000546697 IGFN1Q86VF2 1251 aa13.18□□□□□ -0.3
SSH1-204ENST00000546697 MEX3DQ86XN8 651 aaKnown RBP13.18□□□□□ -0.3
SSH1-204ENST00000546697 LINC00471Q8N535 108 aa13.18□□□□□ -0.3
SSH1-204ENST00000546697 CLDN22Q8N7P3 220 aa13.18□□□□□ -0.3
SSH1-204ENST00000546697 CPEB3Q8NE35 698 aaKnown RBP13.18□□□□□ -0.3
SSH1-204ENST00000546697 FAM168AQ92567 244 aa13.18□□□□□ -0.3
SSH1-204ENST00000546697 MCUR1Q96AQ8 359 aa13.18□□□□□ -0.3
SSH1-204ENST00000546697 Q96M85 177 aa13.18□□□□□ -0.3
SSH1-204ENST00000546697 MRPL37Q9BZE1 423 aaKnown RBP13.18□□□□□ -0.3
SSH1-204ENST00000546697 POLE4Q9NR33 117 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms