RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 SEMG1P04279 462 aa14.25□□□□□ -0.13
CUX1-211ENST00000546411 IRF3Q14653 427 aa14.25□□□□□ -0.13
CUX1-211ENST00000546411 TRAPPC6BQ86SZ2 158 aa14.25□□□□□ -0.13
CUX1-211ENST00000546411 OR6F1Q8NGZ6 308 aa14.25□□□□□ -0.13
CUX1-211ENST00000546411 GPBAR1Q8TDU6 330 aa14.25□□□□□ -0.13
CUX1-211ENST00000546411 MED18Q9BUE0 208 aa14.25□□□□□ -0.13
CUX1-211ENST00000546411 MIXL1Q9H2W2 232 aa14.25□□□□□ -0.13
CUX1-211ENST00000546411 PLEKHJ1Q9NW61 149 aa14.25□□□□□ -0.13
CUX1-211ENST00000546411 OR52A1Q9UKL2 312 aa14.25□□□□□ -0.13
CUX1-211ENST00000546411 SLC7A11Q9UPY5 501 aa14.25□□□□□ -0.13
CUX1-211ENST00000546411 ZNF705EA8MWA4 302 aaPredicted RBP14.25□□□□□ -0.13
CUX1-211ENST00000546411 LMO7DNF2Z398 122 aa14.25□□□□□ -0.13
CUX1-211ENST00000546411 S100A6P06703 90 aa14.25□□□□□ -0.13
CUX1-211ENST00000546411 SRFP11831 508 aa14.25□□□□□ -0.13
CUX1-211ENST00000546411 CDKN2AP42771 156 aaKnown RBP14.25□□□□□ -0.13
CUX1-211ENST00000546411 P2RX1P51575 399 aa14.25□□□□□ -0.13
CUX1-211ENST00000546411 TAS2R19P59542 299 aa14.25□□□□□ -0.13
CUX1-211ENST00000546411 GPR85P60893 370 aa14.25□□□□□ -0.13
CUX1-211ENST00000546411 GSG1LQ6UXU4 331 aa14.25□□□□□ -0.13
CUX1-211ENST00000546411 STAC2Q6ZMT1 411 aa14.25□□□□□ -0.13
CUX1-211ENST00000546411 BATF2Q8N1L9 274 aa14.25□□□□□ -0.13
CUX1-211ENST00000546411 OR2G2Q8NGZ5 317 aa14.25□□□□□ -0.13
CUX1-211ENST00000546411 EVA1AQ9H8M9 152 aa14.25□□□□□ -0.13
CUX1-211ENST00000546411 ADGRL4Q9HBW9 690 aa14.25□□□□□ -0.13
CUX1-211ENST00000546411 KCNN3Q9UGI6 736 aa14.25□□□□□ -0.13
CUX1-211ENST00000546411 STEAP1Q9UHE8 339 aa14.25□□□□□ -0.13
CUX1-211ENST00000546411 AGPAT2O15120 278 aa14.24□□□□□ -0.13
CUX1-211ENST00000546411 HOXB5P09067 269 aa14.24□□□□□ -0.13
CUX1-211ENST00000546411 TAS2R20P59543 309 aa14.24□□□□□ -0.13
CUX1-211ENST00000546411 SYS1Q8N2H4 156 aa14.24□□□□□ -0.13
CUX1-211ENST00000546411 OR4D9Q8NGE8 314 aa14.24□□□□□ -0.13
CUX1-211ENST00000546411 PHB2Q99623 299 aa14.24□□□□□ -0.13
CUX1-211ENST00000546411 BANF2Q9H503 90 aa14.24□□□□□ -0.13
CUX1-211ENST00000546411 MLXQ9UH92 298 aa14.24□□□□□ -0.13
CUX1-211ENST00000546411 CENPFP49454 3210 aa14.24□□□□□ -0.13
CUX1-211ENST00000546411 IGHV3-9P01782 118 aa14.24□□□□□ -0.13
CUX1-211ENST00000546411 CTSBP07858 339 aa14.24□□□□□ -0.13
CUX1-211ENST00000546411 DPP4P27487 766 aa14.24□□□□□ -0.13
CUX1-211ENST00000546411 H1FNTQ75WM6 255 aaPredicted RBP14.24□□□□□ -0.13
CUX1-211ENST00000546411 HAVCR2Q8TDQ0 301 aa14.24□□□□□ -0.13
CUX1-211ENST00000546411 DUSP23Q9BVJ7 150 aa14.24□□□□□ -0.13
CUX1-211ENST00000546411 CYSLTR2Q9NS75 346 aa14.24□□□□□ -0.13
CUX1-211ENST00000546411 B3GALT1Q9Y5Z6 326 aa14.24□□□□□ -0.13
CUX1-211ENST00000546411 METTL12A8MUP2 240 aa14.24□□□□□ -0.13
CUX1-211ENST00000546411 CCSO14618 274 aa14.24□□□□□ -0.13
CUX1-211ENST00000546411 FOLR3P41439 243 aa14.24□□□□□ -0.13
CUX1-211ENST00000546411 RAD52P43351 418 aa14.24□□□□□ -0.13
CUX1-211ENST00000546411 PLP2Q04941 152 aa14.24□□□□□ -0.13
CUX1-211ENST00000546411 OPCMLQ14982 345 aa14.24□□□□□ -0.13
CUX1-211ENST00000546411 CD226Q15762 336 aa14.24□□□□□ -0.13
CUX1-211ENST00000546411 DGAT2L6Q6ZPD8 337 aa14.24□□□□□ -0.13
CUX1-211ENST00000546411 ASH2LQ9UBL3 628 aa14.24□□□□□ -0.13
CUX1-211ENST00000546411 KCNIP3Q9Y2W7 256 aa14.24□□□□□ -0.13
CUX1-211ENST00000546411 LRRC37A2A6NM11 1700 aa14.24□□□□□ -0.13
CUX1-211ENST00000546411 ANKRD36A6QL64 1941 aa14.24□□□□□ -0.13
CUX1-211ENST00000546411 LOC107986453A0A1B0GWG9 222 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 AIPO00170 330 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 RAD51DO75771 328 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 FOLR1P15328 257 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 GZMKP49863 264 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 VAMP2P63027 116 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 ZNF79Q15937 498 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 OR6V1Q8N148 313 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 AGBL5Q8NDL9 886 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 DCUN1D4Q92564 292 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 ANKRD9Q96BM1 317 aaPredicted RBP14.23□□□□□ -0.13
CUX1-211ENST00000546411 CPNE2Q96FN4 548 aaPredicted RBP14.23□□□□□ -0.13
CUX1-211ENST00000546411 DCBLD2Q96PD2 775 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 NIPAL2Q9H841 368 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 A0A0A6YYH2 397 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 TRIM64A6NGJ6 449 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 A6NJ64 397 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 H0YIG0 161 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 C1QBP02746 253 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 BDKRB2P30411 391 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 ZNF74Q16587 644 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 PDSS1Q5T2R2 415 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 WDR88Q6ZMY6 472 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 OVCH1Q7RTY7 1134 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 ZNF321PQ8N8H1 164 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 STEAP2Q8NFT2 490 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 EDAQ92838 391 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 NAT6Q93015 286 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 MMP25Q9NPA2 562 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 FBXO9Q9UK97 447 aaPredicted RBP14.23□□□□□ -0.13
CUX1-211ENST00000546411 V9GYH0 126 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 ANKRD34BA5PLL1 514 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 GABARAPH6UMI1 98 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 CYR61O00622 381 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 IMPA2O14732 288 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 DLSTP36957 453 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 ZNF136P52737 540 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 GUCA2AQ02747 115 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 SSX6Q7RTT6 188 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 TAAR8Q969N4 342 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 SORCS2Q96PQ0 1159 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 SIGLEC11Q96RL6 698 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 TSNAXQ99598 290 aaKnown RBP14.23□□□□□ -0.13
CUX1-211ENST00000546411 EPOPA6NHQ4 379 aa14.23□□□□□ -0.13
CUX1-211ENST00000546411 OR2J2O76002 312 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms