RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 FAM27BQ5VT28 67 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 TMEM154Q6P9G4 183 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 FKBP9P1Q75LS8 142 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 RRM2BQ7LG56 351 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 CYP4Z1Q86W10 505 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 ZNF584Q8IVC4 421 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 C1orf174Q8IYL3 243 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 ALDH16A1Q8IZ83 802 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 OFCC1Q8IZS5 231 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 LRRC18Q8N456 261 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 POU5F2Q8N7G0 328 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 LINC01356Q8N9X3 169 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 SYNPRQ8TBG9 265 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 GEMIN6Q8WXD5 167 aaKnown RBP8.04□□□□□ -1.12
YBX3-218ENST00000546298 BPIFA2Q96DR5 249 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 ZNF416Q9BWM5 594 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 HEATR1Q9H583 2144 aaKnown RBP8.04□□□□□ -1.12
YBX3-218ENST00000546298 HINT3Q9NQE9 182 aaKnown RBP8.04□□□□□ -1.12
YBX3-218ENST00000546298 ARMCX1Q9P291 453 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 A4GNTQ9UNA3 340 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 IGLV3-9A0A075B6K5 115 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 EFCAB9A8MZ26 197 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 PHF1O43189 567 aaPredicted RBP8.03□□□□□ -1.12
YBX3-218ENST00000546298 GMNNO75496 209 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 SLC2A10O95528 541 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 ZNF682O95780 498 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 HPXP02790 462 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 MMP7P09237 267 aaPredicted RBP8.03□□□□□ -1.12
YBX3-218ENST00000546298 CCL2P13500 99 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 ZNF250P15622 560 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 DRD4P21917 467 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 YAP1P46937 504 aaKnown RBP8.03□□□□□ -1.12
YBX3-218ENST00000546298 SLC9A3P48764 834 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 GDI2P50395 445 aaKnown RBP8.03□□□□□ -1.12
YBX3-218ENST00000546298 SLC7A2P52569 658 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 CTXN1P60606 82 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 TEKQ02763 1124 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 PRKCDQ05655 676 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 TOP3AQ13472 1001 aaPredicted RBP8.03□□□□□ -1.12
YBX3-218ENST00000546298 MAD2L1BPQ15013 274 aaPredicted RBP8.03□□□□□ -1.12
YBX3-218ENST00000546298 CR1LQ2VPA4 569 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 PABPC1L2AQ5JQF8 200 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 SLC25A47Q6Q0C1 308 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 HACD2Q6Y1H2 254 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 ZNF730Q6ZMV8 503 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 CBLL1Q75N03 491 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 OAFQ86UD1 273 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 LRP11Q86VZ4 500 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 NRMQ8IXM6 262 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 ARIH2OSQ8N7S6 290 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 ICA1LQ8NDH6 482 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 OR51A7Q8NH64 312 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 ACOT11Q8WXI4 607 aaPredicted RBP8.03□□□□□ -1.12
YBX3-218ENST00000546298 NSMAFQ92636 917 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 HDAC2Q92769 488 aaKnown RBP8.03□□□□□ -1.12
YBX3-218ENST00000546298 NMD3Q96D46 503 aaKnown RBP8.03□□□□□ -1.12
YBX3-218ENST00000546298 SNX18Q96RF0 628 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 WACQ9BTA9 647 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 ANKRD19PQ9H560 264 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 ZNF446Q9NWS9 450 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 NKIRAS2Q9NYR9 191 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 TAAR3PQ9P1P4 343 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 TMEFF2Q9UIK5 374 aaPredicted RBP8.03□□□□□ -1.12
YBX3-218ENST00000546298 FZR1Q9UM11 496 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 FAM32AQ9Y421 112 aaKnown RBP8.03□□□□□ -1.12
YBX3-218ENST00000546298 TIMM10BQ9Y5J6 103 aa8.03□□□□□ -1.12
YBX3-218ENST00000546298 NIPBLQ6KC79 2804 aaeCLIP8.03□□□□□ -1.12
YBX3-218ENST00000546298 C17orf100A8MU93 164 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 B4DSR2 109 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 LYNX1G3V0Z9 82 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 AHCYL1O43865 530 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 PIP5K1CO60331 668 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 IGHMP01871 453 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 TFP02787 698 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 CST2P09228 141 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 LYNX1P0DP58 116 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 NAT2P11245 290 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 ZNF32P17041 273 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 MAKP20794 623 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 CCNOP22674 350 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 COL8A2P25067 703 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 STOMP27105 288 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 GCH1P30793 250 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 CDAP32320 146 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 RPL4P36578 427 aaKnown RBP8.02□□□□□ -1.13
YBX3-218ENST00000546298 SRP14P37108 136 aaKnown RBP8.02□□□□□ -1.13
YBX3-218ENST00000546298 DVL1P1P54792 670 aaPredicted RBP8.02□□□□□ -1.13
YBX3-218ENST00000546298 CDH15P55291 814 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 ZNF718Q3SXZ3 478 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 FAM209AQ5JX71 171 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 ELFN2Q5R3F8 820 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 LIPNQ5VXI9 398 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 ARL9Q6T311 187 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 VTCN1Q7Z7D3 282 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 PAQR4Q8N4S7 273 aaPredicted RBP8.02□□□□□ -1.13
YBX3-218ENST00000546298 OR1J1Q8NGS3 322 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 FAM162AQ96A26 154 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 CMTM5Q96DZ9 223 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 C1orf159Q96HA4 380 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 HSH2DQ96JZ2 352 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms