RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 CRLF2Q9HC73 371 aa14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 GPR35Q9HC97 309 aa14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 SLC7A10Q9NS82 523 aa14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 TAS2R16Q9NYV7 291 aa14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 UBAP1Q9NZ09 502 aa14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 COQ3Q9NZJ6 369 aa14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 CCDC182A6NF36 153 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 ZNHIT1O43257 154 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 UPK3AO75631 287 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 FARS2O95363 451 aaKnown RBP14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 GAAP10253 952 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 AGAP20933 346 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 CRHBPP24387 322 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 DCKP27707 260 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 GSTT1P30711 240 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 ROR2Q01974 943 aaKnown RBP14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 PCK2Q16822 640 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 SLC25A35Q3KQZ1 300 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 CARD17Q5XLA6 110 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 UGT2A3Q6UWM9 527 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 RHOUQ7L0Q8 258 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 SHFQ7M4L6 423 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 SYT9Q86SS6 491 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 ZNF786Q8N393 782 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 C17orf78Q8N4C9 275 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 ZNF454Q8N9F8 522 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 SLC26A10Q8NG04 563 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 OR9Q1Q8NGQ5 310 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 OR6K6Q8NGW6 343 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 MYDGFQ969H8 173 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 MRPL48Q96GC5 212 aaKnown RBP14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 ALKBH3Q96Q83 286 aaPredicted RBP14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 HCAR1Q9BXC0 346 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 YIPF3Q9GZM5 350 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 OR10A4Q9H209 315 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 DUSP21Q9H596 190 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 SIAEQ9HAT2 523 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 SRA1Q9HD15 236 aaKnown RBP14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 FGF20Q9NP95 211 aaPredicted RBP14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 FKBP14Q9NWM8 211 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 PSORS1C1Q9UIG5 152 aa14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 EXOGQ9Y2C4 368 aaKnown RBP14.12□□□□□ -0.15
PRPF40A-212ENST00000545856 TRIM64A6NGJ6 449 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 M0R129 80 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 DCTN6O00399 190 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 CCL21O00585 134 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 FAM20BO75063 409 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 SBK2P0C263 348 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 MSR1P21757 451 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 CHRNB4P30926 498 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 SIRPAP78324 504 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 FMODQ06828 376 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 SOWAHCQ53LP3 525 aaPredicted RBP14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 FAM27BQ5VT28 67 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 OR7E24Q6IFN5 339 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 LAIR2Q6ISS4 152 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 SLC16A9Q7RTY1 509 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 GABRG1Q8N1C3 465 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 UBE2J2Q8N2K1 259 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 NAXEQ8NCW5 288 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 BBS1Q8NFJ9 593 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 OR10H5Q8NGA6 315 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 HAVCR2Q8TDQ0 301 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 ZNF775Q96BV0 537 aaPredicted RBP14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 RNFT2Q96EX2 444 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 LRRC46Q96FV0 321 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 INTS14Q96SY0 518 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 FOXB1Q99853 325 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 HDHD5Q9BXW7 423 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 OBP2BQ9NPH6 170 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 TMEM38BQ9NVV0 291 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 ELOVL5Q9NYP7 299 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 JKAMPQ9P055 326 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 UGT2A1Q9Y4X1 527 aa14.11□□□□□ -0.15
PRPF40A-212ENST00000545856 A0A0G2JNJ9 132 aa14.1□□□□□ -0.15
PRPF40A-212ENST00000545856 OR2T7P0C7T2 308 aa14.1□□□□□ -0.15
PRPF40A-212ENST00000545856 ZNF823P16415 610 aa14.1□□□□□ -0.15
PRPF40A-212ENST00000545856 ATP6V1E1P36543 226 aa14.1□□□□□ -0.15
PRPF40A-212ENST00000545856 ENTPD1P49961 510 aa14.1□□□□□ -0.15
PRPF40A-212ENST00000545856 PCBD1P61457 104 aa14.1□□□□□ -0.15
PRPF40A-212ENST00000545856 SLC35A2P78381 396 aa14.1□□□□□ -0.15
PRPF40A-212ENST00000545856 FOXF2Q12947 444 aa14.1□□□□□ -0.15
PRPF40A-212ENST00000545856 CEACAM16Q2WEN9 425 aa14.1□□□□□ -0.15
PRPF40A-212ENST00000545856 FBXL19-AS1Q494R0 122 aa14.1□□□□□ -0.15
PRPF40A-212ENST00000545856 VWA1Q6PCB0 445 aa14.1□□□□□ -0.15
PRPF40A-212ENST00000545856 PLXDC2Q6UX71 529 aa14.1□□□□□ -0.15
PRPF40A-212ENST00000545856 BTLAQ7Z6A9 289 aa14.1□□□□□ -0.15
PRPF40A-212ENST00000545856 WDFY1Q8IWB7 410 aa14.1□□□□□ -0.15
PRPF40A-212ENST00000545856 TIGD4Q8IY51 512 aa14.1□□□□□ -0.15
PRPF40A-212ENST00000545856 RPRMLQ8N4K4 120 aa14.1□□□□□ -0.15
PRPF40A-212ENST00000545856 ZNF540Q8NDQ6 660 aa14.1□□□□□ -0.15
PRPF40A-212ENST00000545856 BPIFB6Q8NFQ5 453 aa14.1□□□□□ -0.15
PRPF40A-212ENST00000545856 OR2T27Q8NH04 317 aa14.1□□□□□ -0.15
PRPF40A-212ENST00000545856 RBM24Q9BX46 236 aaKnown RBP14.1□□□□□ -0.15
PRPF40A-212ENST00000545856 C12orf49Q9H741 205 aa14.1□□□□□ -0.15
PRPF40A-212ENST00000545856 ZNF696Q9H7X3 374 aa14.1□□□□□ -0.15
PRPF40A-212ENST00000545856 MED20Q9H944 212 aa14.1□□□□□ -0.15
PRPF40A-212ENST00000545856 POLE4Q9NR33 117 aa14.1□□□□□ -0.15
PRPF40A-212ENST00000545856 Q9UFV3 132 aa14.1□□□□□ -0.15
PRPF40A-212ENST00000545856 DIMT1Q9UNQ2 313 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms