RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 NPIPB4C9JG80 1138 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 NPIPB6E9PJ23 425 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 C11orf98E9PRG8 122 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 NDUFAB1O14561 156 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 RNF13O43567 381 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 NDUFS7O75251 213 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 ENTPD5O75356 428 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 SERPINI2O75830 405 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 SEC14L2O76054 403 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 SCGB1D2O95969 90 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 PLA2G1BP04054 148 aaKnown RBP6.65□□□□□ -1.34
SNHG1-223ENST00000545440 CSF3P09919 207 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 PGA4P0DJD7 388 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 PGA3P0DJD8 388 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 UMPSP11172 480 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 COX4I1P13073 169 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 B4GALT1P15291 398 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 TNFRSF1BP20333 461 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 KDELR2P33947 212 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 CSNK1A1P48729 337 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 IDH3GP51553 393 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-223ENST00000545440 NUDT6P53370 316 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 UGT2B15P54855 530 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 BIDP55957 195 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 DSCR9P59020 149 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 SNRPD2P62316 118 aaKnown RBP6.65□□□□□ -1.34
SNHG1-223ENST00000545440 SELENOWP63302 87 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 CAMK2DQ13557 499 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 EFNB3Q15768 340 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 GSG1Q2KHT4 349 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 GFOD2Q3B7J2 385 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 NRN1LQ496H8 165 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 CARD17Q5XLA6 110 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 C8orf82Q6P1X6 216 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-223ENST00000545440 CLEC2AQ6UVW9 174 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 ZNF813Q6ZN06 617 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 Q71RC1 249 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-223ENST00000545440 SLC35D2Q76EJ3 337 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 SPATA21Q7Z572 469 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 MDP1Q86V88 176 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 MYPOPQ86VE0 399 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-223ENST00000545440 SLC15A3Q8IY34 581 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 KLHL36Q8N4N3 616 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 IL17RDQ8NFM7 739 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 OR4F15Q8NGB8 312 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 OR6N1Q8NGY5 312 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 TMEM255BQ8WV15 326 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 LIPHQ8WWY8 451 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 LZICQ8WZA0 190 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 TMEM54Q969K7 222 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 ZNF566Q969W8 418 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 SLC25A44Q96H78 314 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-223ENST00000545440 TXNDC15Q96J42 360 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 HOPXQ9BPY8 73 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-223ENST00000545440 EMC6Q9BV81 110 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 NSRP1Q9H0G5 558 aaKnown RBP6.65□□□□□ -1.34
SNHG1-223ENST00000545440 DENND2DQ9H6A0 471 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-223ENST00000545440 CMTM6Q9NX76 183 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 TAS2R5Q9NYW4 299 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 STX18Q9P2W9 335 aaKnown RBP6.65□□□□□ -1.34
SNHG1-223ENST00000545440 ABCD2Q9UBJ2 740 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 RIMS3Q9UJD0 308 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 FBXO9Q9UK97 447 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-223ENST00000545440 FBXL3Q9UKT7 428 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 IGHV2OR16-5A0A0B4J2B6 119 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 B9A039 149 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 NME4O00746 187 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 SSX4O60224 188 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 SHOX2O60902 331 aaPredicted RBP6.64□□□□□ -1.35
SNHG1-223ENST00000545440 OR7A10O76100 309 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 UBL3O95164 117 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 IGHG1P01857 330 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 HIST1H2ABP04908 130 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 IFNW1P05000 195 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 CELA3BP08861 270 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 TSPAN19P0C672 248 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 CALCRP30988 508 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 IFNA8P32881 189 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 SERPINF1P36955 418 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 CAPZA2P47755 286 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 OR1E2P47887 323 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 NUDT2P50583 147 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 DAP3P51398 398 aaKnown RBP6.64□□□□□ -1.35
SNHG1-223ENST00000545440 SLC7A2P52569 658 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 EFNA4P52798 201 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 LIPEQ05469 1076 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 RPL18Q07020 188 aaKnown RBP6.64□□□□□ -1.35
SNHG1-223ENST00000545440 KRTAP1-1Q07627 177 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 ST3GAL3Q11203 375 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 NPRL3Q12980 569 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 MALLQ13021 153 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 RAB35Q15286 201 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 ADIPOQQ15848 244 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 HIST3H2AQ7L7L0 130 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 DPPA2Q7Z7J5 298 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 NKAIN4Q8IVV8 208 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 WDFY1Q8IWB7 410 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 OFCC1Q8IZS5 231 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 LRRC17Q8N6Y2 441 aa6.64□□□□□ -1.35
SNHG1-223ENST00000545440 NOXO1Q8NFA2 376 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms