RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 PTOV1Q86YD1 416 aa11.71□□□□□ -0.54
CHD4-211ENST00000544484 ZADH2Q8N4Q0 377 aa11.71□□□□□ -0.54
CHD4-211ENST00000544484 SLC25A31Q9H0C2 315 aa11.71□□□□□ -0.54
CHD4-211ENST00000544484 MED29Q9NX70 200 aa11.71□□□□□ -0.54
CHD4-211ENST00000544484 NDRG4Q9ULP0 352 aaKnown RBP11.71□□□□□ -0.54
CHD4-211ENST00000544484 K7EPK0 472 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 SGCEO43556 437 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 GLSO94925 669 aaPredicted RBP11.7□□□□□ -0.54
CHD4-211ENST00000544484 TGFBR1P36897 503 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 GALEQ14376 348 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 FAM71E2Q8N5Q1 922 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 PKMYT1Q99640 499 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 CHST11Q9NPF2 352 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 N4BP2Q86UW6 1770 aaPredicted RBP11.7□□□□□ -0.54
CHD4-211ENST00000544484 LOC100289279A0A1B0GTE1 492 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 FADS1O60427 444 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 OR8B8Q15620 311 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 MSMO1Q15800 293 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 SHEQ5VZ18 495 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 SLC25A43Q8WUT9 341 aaPredicted RBP11.7□□□□□ -0.54
CHD4-211ENST00000544484 GFOD1Q9NXC2 390 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 SLC5A6Q9Y289 635 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 FABP7O15540 132 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 MED6O75586 246 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 SPI1P17947 270 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 NPY4RP50391 375 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 EMDP50402 254 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 DUSP2Q05923 314 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 FCN2Q15485 313 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 OGFOD3Q6PK18 319 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 CPEB2Q7Z5Q1 589 aaKnown RBP11.7□□□□□ -0.54
CHD4-211ENST00000544484 MRPL41Q8IXM3 137 aaKnown RBP11.7□□□□□ -0.54
CHD4-211ENST00000544484 OR6M1Q8NGM8 313 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 OR10K1Q8NGX5 313 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 H1FXQ92522 213 aaKnown RBP11.7□□□□□ -0.54
CHD4-211ENST00000544484 ARRDC1-AS1Q9H2J1 176 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 HRASLSQ9HDD0 168 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.7□□□□□ -0.541e-7■■■■□ 26.7
CHD4-211ENST00000544484 GPR173Q9NS66 373 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 IGHV3-15A0A0B4J1V0 119 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 ATP1B1P05026 303 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 RPL18Q07020 188 aaKnown RBP11.7□□□□□ -0.54
CHD4-211ENST00000544484 PHLDA2Q53GA4 152 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 TMEM81Q6P7N7 255 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 ADGRE4PQ86SQ3 457 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 SPACA5Q96QH8 159 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 PSD2Q9BQI7 771 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 ZNF436Q9C0F3 470 aaPredicted RBP11.7□□□□□ -0.54
CHD4-211ENST00000544484 BOLA1Q9Y3E2 137 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 FBXO7Q9Y3I1 522 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 TRABD2BA6NFA1 517 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 STMND1H3BQB6 276 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 GLB1P16278 677 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 ACSM1Q08AH1 577 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 HYAL1Q12794 435 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 KCNJ8Q15842 424 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 ACTBL2Q562R1 376 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 OR51E1Q8TCB6 317 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 MENTQ9BUN1 341 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 SUCNR1Q9BXA5 334 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 CMC2Q9NRP2 79 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 TAS2R4Q9NYW5 299 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 EPHA2P29317 976 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 OR13C5Q8NGS8 318 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 RAB39BQ96DA2 213 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 SEC22CQ9BRL7 303 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 PLA2G2FQ9BZM2 168 aa11.7□□□□□ -0.54
CHD4-211ENST00000544484 TCRBV5S2A0A599 114 aa11.69□□□□□ -0.54
CHD4-211ENST00000544484 MSTNO14793 375 aa11.69□□□□□ -0.54
CHD4-211ENST00000544484 SIX6O95475 246 aa11.69□□□□□ -0.54
CHD4-211ENST00000544484 UBBP0CG47 229 aa11.69□□□□□ -0.54
CHD4-211ENST00000544484 ZNF728P0DKX0 622 aa11.69□□□□□ -0.54
CHD4-211ENST00000544484 GP2P55259 537 aaKnown RBP11.69□□□□□ -0.54
CHD4-211ENST00000544484 CATR1Q13166 79 aa11.69□□□□□ -0.54
CHD4-211ENST00000544484 ING1Q9UK53 422 aaPredicted RBP11.69□□□□□ -0.54
CHD4-211ENST00000544484 ANKRD33BA6NCL7 494 aa11.69□□□□□ -0.54
CHD4-211ENST00000544484 OR6C6A6NF89 314 aa11.69□□□□□ -0.54
CHD4-211ENST00000544484 PDLIM3Q53GG5 364 aaPredicted RBP11.69□□□□□ -0.54
CHD4-211ENST00000544484 FAM26EQ8N5C1 309 aa11.69□□□□□ -0.54
CHD4-211ENST00000544484 SUMF1Q8NBK3 374 aa11.69□□□□□ -0.54
CHD4-211ENST00000544484 LINC00615Q96LM1 132 aaPredicted RBP11.69□□□□□ -0.54
CHD4-211ENST00000544484 H0YIG0 161 aa11.69□□□□□ -0.54
CHD4-211ENST00000544484 RAB27BO00194 218 aa11.69□□□□□ -0.54
CHD4-211ENST00000544484 MC2RQ01718 297 aa11.69□□□□□ -0.54
CHD4-211ENST00000544484 CAMK2BQ13554 666 aa11.69□□□□□ -0.54
CHD4-211ENST00000544484 EBPQ15125 230 aaKnown RBP11.69□□□□□ -0.54
CHD4-211ENST00000544484 CCDC74BQ96LY2 380 aa11.69□□□□□ -0.54
CHD4-211ENST00000544484 PFDN5Q99471 154 aa11.69□□□□□ -0.54
CHD4-211ENST00000544484 LOC107986453A0A1B0GWG9 222 aa11.69□□□□□ -0.54
CHD4-211ENST00000544484 PHF1O43189 567 aaPredicted RBP11.69□□□□□ -0.54
CHD4-211ENST00000544484 SNRNP70P08621 437 aaKnown RBP11.69□□□□□ -0.54
CHD4-211ENST00000544484 ZGLP1P0C6A0 271 aa11.69□□□□□ -0.54
CHD4-211ENST00000544484 SDHAP31040 664 aa11.69□□□□□ -0.54
CHD4-211ENST00000544484 RPL35P42766 123 aaKnown RBP11.69□□□□□ -0.54
CHD4-211ENST00000544484 HNRNPFP52597 415 aaKnown RBP11.69□□□□□ -0.54
CHD4-211ENST00000544484 GRB2P62993 217 aaKnown RBP11.69□□□□□ -0.54
CHD4-211ENST00000544484 ZNF169Q14929 603 aaPredicted RBP11.69□□□□□ -0.54
CHD4-211ENST00000544484 AGERQ15109 404 aa11.69□□□□□ -0.54
CHD4-211ENST00000544484 ZNF687Q8N1G0 1237 aa11.69□□□□□ -0.54
CHD4-211ENST00000544484 PLCXD1Q9NUJ7 323 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms