RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 OXA1LQ15070 435 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 CD300LGQ6UXG3 332 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 DNM1P46Q6ZS02 220 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 ARCQ7LC44 396 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 ASCL5Q7RTU5 278 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 MARCH9Q86YJ5 346 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 EGFL6Q8IUX8 553 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 SLC2A14Q8TDB8 520 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 CHCHD10Q8WYQ3 142 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-207ENST00000544052 NEIL2Q969S2 332 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 ZNF707Q96C28 371 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-207ENST00000544052 CMTM7Q96FZ5 175 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 CPB2Q96IY4 423 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 SERAC1Q96JX3 654 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 B3GALT6Q96L58 329 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 ZNF184Q99676 751 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-207ENST00000544052 MRPL45Q9BRJ2 306 aaKnown RBP2.72□□□□□ -1.97
SCFD1-207ENST00000544052 PKIBQ9C010 78 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 NCOR1P1Q9H4R4 102 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 ANKRD19PQ9H560 264 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 RNF167Q9H6Y7 350 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 KCNIP3Q9Y2W7 256 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 GPR179Q6PRD1 2367 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 CEP250Q9BV73 2442 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 PHLPP2Q6ZVD8 1323 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 SPAG17Q6Q759 2223 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 CACNA1AO00555 2505 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 EP300Q09472 2414 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-207ENST00000544052 GOLGA8SH3BPF8 625 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 LYPLA1O75608 230 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-207ENST00000544052 CST1P01037 141 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 PTPRZ1P23471 2315 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-207ENST00000544052 CASP14P31944 242 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 SHMT2P34897 504 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 PLK1P53350 603 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 PSMC5P62195 406 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 EGFEM1PQ0D2K5 195 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 LAMTOR4Q0VGL1 99 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 TMED1Q13445 227 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 UTF1Q5T230 341 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 METTL11BQ5VVY1 283 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 FAM220AQ7Z4H9 259 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 CEND1Q8N111 149 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 CCDC148Q8NFR7 591 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 OR52I1Q8NGK6 324 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 ZPLD1Q8TCW7 415 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 RASD2Q96D21 266 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 ZNF641Q96N77 438 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-207ENST00000544052 LXNQ9BS40 222 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 NXF3Q9H4D5 531 aaKnown RBP2.72□□□□□ -1.97
SCFD1-207ENST00000544052 SUDS3Q9H7L9 328 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-207ENST00000544052 PTGES2Q9H7Z7 377 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 KLHL28Q9NXS3 571 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 RPL36Q9Y3U8 105 aaKnown RBP2.72□□□□□ -1.97
SCFD1-207ENST00000544052 FRYLO94915 3013 aa2.71□□□□□ -1.97
SCFD1-207ENST00000544052 F5P12259 2224 aa2.71□□□□□ -1.98
SCFD1-207ENST00000544052 MYOFQ9NZM1 2061 aa2.71□□□□□ -1.98
SCFD1-207ENST00000544052 IGKV3D-20A0A0C4DH25 116 aa2.71□□□□□ -1.98
SCFD1-207ENST00000544052 ABCD4O14678 606 aa2.71□□□□□ -1.98
SCFD1-207ENST00000544052 UGT1A9O60656 530 aa2.71□□□□□ -1.98
SCFD1-207ENST00000544052 LYPLA2O95372 231 aa2.71□□□□□ -1.98
SCFD1-207ENST00000544052 LGI1O95970 557 aa2.71□□□□□ -1.98
SCFD1-207ENST00000544052 IGHV3-23P01764 117 aa2.71□□□□□ -1.98
SCFD1-207ENST00000544052 SEMG1P04279 462 aa2.71□□□□□ -1.98
SCFD1-207ENST00000544052 NTSP30990 170 aa2.71□□□□□ -1.98
SCFD1-207ENST00000544052 ARL2P36404 184 aa2.71□□□□□ -1.98
SCFD1-207ENST00000544052 DMTNQ08495 405 aa2.71□□□□□ -1.98
SCFD1-207ENST00000544052 PPP1R7Q15435 360 aa2.71□□□□□ -1.98
SCFD1-207ENST00000544052 SSX2Q16385 188 aa2.71□□□□□ -1.98
SCFD1-207ENST00000544052 PRAMEF20Q5VT98 475 aa2.71□□□□□ -1.98
SCFD1-207ENST00000544052 TWF2Q6IBS0 349 aaKnown RBP2.71□□□□□ -1.98
SCFD1-207ENST00000544052 RNASEKQ6P5S7 137 aaKnown RBP2.71□□□□□ -1.98
SCFD1-207ENST00000544052 UNQ9370/PRO34162Q6UXP9 181 aa2.71□□□□□ -1.98
SCFD1-207ENST00000544052 HSDL2Q6YN16 418 aa2.71□□□□□ -1.98
SCFD1-207ENST00000544052 UTS2BQ765I0 119 aa2.71□□□□□ -1.98
SCFD1-207ENST00000544052 FTMTQ8N4E7 242 aa2.71□□□□□ -1.98
SCFD1-207ENST00000544052 ACOT4Q8N9L9 421 aa2.71□□□□□ -1.98
SCFD1-207ENST00000544052 KCNG3Q8TAE7 436 aa2.71□□□□□ -1.98
SCFD1-207ENST00000544052 CCDC12Q8WUD4 166 aaPredicted RBP2.71□□□□□ -1.98
SCFD1-207ENST00000544052 CNN2Q99439 309 aaKnown RBP2.71□□□□□ -1.98
SCFD1-207ENST00000544052 NRBP2Q9NSY0 501 aa2.71□□□□□ -1.98
SCFD1-207ENST00000544052 TREM2Q9NZC2 230 aa2.71□□□□□ -1.98
SCFD1-207ENST00000544052 SPATA7Q9P0W8 599 aa2.71□□□□□ -1.98
SCFD1-207ENST00000544052 VSIG4Q9Y279 399 aa2.71□□□□□ -1.98
SCFD1-207ENST00000544052 PRG3Q9Y2Y8 225 aaPredicted RBP2.71□□□□□ -1.98
SCFD1-207ENST00000544052 CAB39Q9Y376 341 aaPredicted RBP2.71□□□□□ -1.98
SCFD1-207ENST00000544052 UGT2A1Q9Y4X1 527 aa2.71□□□□□ -1.98
SCFD1-207ENST00000544052 TNRC6BQ9UPQ9 1833 aaKnown RBP2.71□□□□□ -1.98
SCFD1-207ENST00000544052 WDR87Q6ZQQ6 2873 aa2.71□□□□□ -1.98
SCFD1-207ENST00000544052 PHF3Q92576 2039 aaKnown RBP2.7□□□□□ -1.98
SCFD1-207ENST00000544052 PPIAL4EA0A075B759 164 aa2.7□□□□□ -1.98
SCFD1-207ENST00000544052 IGHV7-81A0A0B4J1V7 117 aa2.7□□□□□ -1.98
SCFD1-207ENST00000544052 ARL5CA6NH57 179 aa2.7□□□□□ -1.98
SCFD1-207ENST00000544052 NCF1BA6NI72 391 aaPredicted RBP2.7□□□□□ -1.98
SCFD1-207ENST00000544052 A6NIZ1 184 aa2.7□□□□□ -1.98
SCFD1-207ENST00000544052 OR2AG2A6NM03 316 aa2.7□□□□□ -1.98
SCFD1-207ENST00000544052 NCF1CA8MVU1 366 aaPredicted RBP2.7□□□□□ -1.98
SCFD1-207ENST00000544052 E9PBE3 544 aa2.7□□□□□ -1.98
SCFD1-207ENST00000544052 DNALI1O14645 258 aaPredicted RBP2.7□□□□□ -1.98
SCFD1-207ENST00000544052 IGHV3-48P01763 117 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms