RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 SYT3Q9BQG1 590 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 FUZQ9BT04 418 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 SOX7Q9BT81 388 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 BPESC1Q9GZL8 116 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 DCAF13Q9NV06 445 aaKnown RBP11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 TMEM160Q9NX00 188 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 STX18Q9P2W9 335 aaKnown RBP11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 REV1Q9UBZ9 1251 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 EGFL7Q9UHF1 273 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 FZR1Q9UM11 496 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 IGLV3-9A0A075B6K5 115 aa11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 A0A1W2PRQ8 180 aa11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 GMNCA6NCL1 334 aa11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 EFCAB9A8MZ26 197 aa11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 LYNX1G3V0Z9 82 aa11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 PTP4A3O75365 173 aa11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 CLPTM1O96005 669 aa11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 SCG5P05408 212 aa11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 TACSTD2P09758 323 aa11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 LYNX1P0DP58 116 aa11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 SAGP10523 405 aaPredicted RBP11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ZNF250P15622 560 aa11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 IFNA8P32881 189 aa11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ALDH3B1P43353 468 aa11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ERVS71-1P61550 626 aa11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 RPS23P62266 143 aaKnown RBP11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 GALK2Q01415 458 aa11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 TOP3AQ13472 1001 aaPredicted RBP11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 DGCR6Q14129 220 aa11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 GGTLC2Q14390 218 aa11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 MAD2L1BPQ15013 274 aaPredicted RBP11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ELFN2Q5R3F8 820 aa11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 GKAP1Q5VSY0 366 aaPredicted RBP11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 GLYATQ6IB77 296 aa11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ZNF730Q6ZMV8 503 aa11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 PIGWQ7Z7B1 504 aa11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 OAFQ86UD1 273 aa11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 UBASH3BQ8TF42 649 aa11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 FAM162AQ96A26 154 aa11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 MSI2Q96DH6 328 aaKnown RBP11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 DHRS1Q96LJ7 313 aa11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 FAM107BQ9H098 131 aa11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ANKRD19PQ9H560 264 aa11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 SPAG4Q9NPE6 437 aa11.24□□□□□ -0.61
TNFRSF1A-215ENST00000543359 LOC100509620A0A075B734 347 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 M0R233 179 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 HPXP02790 462 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 SEMG1P04279 462 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 FAM157BP0CG42 384 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ZNF16P17020 682 aaPredicted RBP11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ZNF23P17027 643 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ZNF32P17041 273 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 COL8A2P25067 703 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 APEX1P27695 318 aaKnown RBP11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 GPR4P46093 362 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 LIMS1P48059 325 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 GZMKP49863 264 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 UCP2P55851 309 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 FXYD6P3P58550 94 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ERVK-25P63136 954 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 PSG4Q00888 419 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 CD47Q08722 323 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 SEC23BQ15437 767 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 CARTPTQ16568 116 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ZBED5Q49AG3 693 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 PABPC1L2AQ5JQF8 200 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 PODNL1Q6PEZ8 512 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 FKBP9P1Q75LS8 142 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 FAM122BQ7Z309 247 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 RNF148Q8N7C7 305 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ARIH2OSQ8N7S6 290 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ZNF540Q8NDQ6 660 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 NSMAFQ92636 917 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 POM121L2Q96KW2 1035 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 RBP7Q96R05 134 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 TPK1Q9H3S4 243 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 MS4A5Q9H3V2 200 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 C1orf198Q9H425 327 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 GORASP2Q9H8Y8 452 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 RNF121Q9H920 327 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 DYNLRB1Q9NP97 96 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 CD300AQ9UGN4 299 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 RPS6KA6Q9UK32 745 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ADAM18Q9Y3Q7 739 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 FBN3Q75N90 2809 aa11.23□□□□□ -0.61
TNFRSF1A-215ENST00000543359 TRBV4-1A0A0J9YWV2 114 aa11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 LRP5LA4QPB2 252 aa11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 NCR1O76036 304 aa11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 H1F0P07305 194 aaKnown RBP11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 CD14P08571 375 aa11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 CST2P09228 141 aa11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 NAT2P11245 290 aa11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 HSD17B1P14061 328 aa11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 RHCEP18577 417 aa11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 TCN1P20061 433 aaPredicted RBP11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 LAP3P28838 519 aa11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 IL2RGP31785 369 aa11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 WNT5AP41221 380 aa11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 OMPP47874 163 aa11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ENDOGQ14249 297 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms