RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 IL12AP29459 219 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 HTR1FP30939 366 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 NAA10P41227 235 aaPredicted RBP3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 NSG1P42857 185 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 SLC1A2P43004 574 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 YAP1P46937 504 aaKnown RBP3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 ALDH3B2P48448 385 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 MRPL19P49406 292 aaKnown RBP3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 ARRB1P49407 418 aaPredicted RBP3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 HNRNPA3P51991 378 aaKnown RBP3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 ARHGDIBP52566 201 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 MRPS22P82650 360 aaKnown RBP3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 MRPS11P82912 194 aaKnown RBP3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 RELAQ04206 551 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 RAD51Q06609 339 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 SLAQ13239 276 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 OR5I1Q13606 314 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 FASTKD3Q14CZ7 662 aaKnown RBP3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 KCTD19Q17RG1 926 aaPredicted RBP3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 C17orf58Q2M2W7 97 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 HSDL1Q3SXM5 330 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 ZNF876PQ49A33 203 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 ZCWPW2Q504Y3 356 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 VWA2Q5GFL6 755 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 XKR4Q5GH76 650 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 CTRB2Q6GPI1 263 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 C8orf74Q6P047 294 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 ASCL5Q7RTU5 278 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 CATSPER3Q86XQ3 398 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 MCOLN2Q8IZK6 566 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 FAM58AQ8N1B3 248 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 KIF2BQ8N4N8 673 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 MS4A15Q8N5U1 240 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 ASCC1Q8N9N2 400 aaKnown RBP3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 ANGPTL6Q8NI99 470 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 CD300LFQ8TDQ1 290 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 SETD7Q8WTS6 366 aaKnown RBP3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 STMN2Q93045 179 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 CIDECQ96AQ7 238 aaPredicted RBP3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 TLCD1Q96CP7 247 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 CCDC126Q96EE4 140 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 NRBF2Q96F24 287 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 OXGR1Q96P68 337 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 XPO6Q96QU8 1125 aaKnown RBP3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 F2RL3Q96RI0 385 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 MCHR1Q99705 422 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 SLC29A1Q99808 456 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 MCRIP2Q9BUT9 160 aaKnown RBP3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 SPZ1Q9BXG8 430 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 OR2AG1Q9H205 316 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 OR51M1Q9H341 326 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 CAB39LQ9H9S4 337 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 THUMPD1Q9NXG2 353 aaKnown RBP3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 B3GNT2Q9NY97 397 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 STOX2Q9P2F5 926 aaPredicted RBP3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 MYEF2Q9P2K5 600 aaKnown RBP3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 PRODH2Q9UF12 536 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 RIMS3Q9UJD0 308 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 CFL2Q9Y281 166 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 RPL36Q9Y3U8 105 aaKnown RBP3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 MMP24Q9Y5R2 645 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 LAMA2P24043 3122 aaKnown RBP3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 ABCC12Q96J65 1359 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 SMCHD1A6NHR9 2005 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 IGLV4-3A0A075B6K6 122 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 KCNE1BA0A087WTH5 132 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 TRBV9A0A0B4J1U6 114 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 KLF18A0A0U1RQI7 1052 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 SMIM31A0A1B0GVY4 71 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 SIGLEC16A6NMB1 481 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 OR5K4A6NMS3 321 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 CENPBD1B2RD01 187 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 GOLGA8MH3BSY2 632 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 KDELR3O43731 214 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 AIREO43918 545 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 DUS4LO95620 317 aaKnown RBP3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 SEMA4FO95754 770 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 SHBGP04278 402 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 HOXD4P09016 255 aaPredicted RBP3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 RPS12P25398 132 aaKnown RBP3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 CD82P27701 267 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 CALCRP30988 508 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 PCK1P35558 622 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 DDOSTP39656 456 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 PTGDSP41222 190 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 SLC1A1P43005 524 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 CBX5P45973 191 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 CX3CR1P49238 355 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 TMED10P49755 219 aaKnown RBP3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 KLK7P49862 253 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 CLDN18P56856 261 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 CALCOCO2Q13137 446 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 SLC39A6Q13433 755 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 CYLC2Q14093 348 aaPredicted RBP3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 MICAQ29983 383 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 OR2G6Q5TZ20 316 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 H3F3CQ6NXT2 135 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 ZNF600Q6ZNG1 722 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 STXBP4Q6ZWJ1 553 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 DCUN1D3Q8IWE4 304 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms