RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 SPATA24Q86W54 205 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 RNF130Q86XS8 419 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 PEX5LQ8IYB4 626 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 OR8H2Q8N162 312 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 CLEC4FQ8N1N0 589 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 ZNF619Q8N2I2 560 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 TMCO5AQ8N6Q1 288 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 CNEP1R1Q8N9A8 125 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 C9orf106Q8NAJ2 232 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 ZBTB8BQ8NAP8 495 aaPredicted RBP4.76□□□□□ -1.65
CPSF7-220ENST00000541963 OR5M1Q8NGP8 315 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 OR2V1Q8NHB1 315 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 ZNF563Q8TA94 476 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 GPR119Q8TDV5 335 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 ZFP90Q8TF47 636 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 NTN5Q8WTR8 489 aaPredicted RBP4.76□□□□□ -1.65
CPSF7-220ENST00000541963 FAM222BQ8WU58 562 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 RAB8BQ92930 207 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 ERGIC1Q969X5 290 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 ARSGQ96EG1 525 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 TEX37Q96LM6 180 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 RNF145Q96MT1 663 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 TRNT1Q96Q11 434 aaKnown RBP4.76□□□□□ -1.65
CPSF7-220ENST00000541963 OR52B2Q96RD2 323 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 ZNF184Q99676 751 aaPredicted RBP4.76□□□□□ -1.65
CPSF7-220ENST00000541963 SLC39A3Q9BRY0 314 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 INPP5KQ9BT40 448 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 SF3B5Q9BWJ5 86 aaKnown RBP4.76□□□□□ -1.65
CPSF7-220ENST00000541963 RBM24Q9BX46 236 aaKnown RBP4.76□□□□□ -1.65
CPSF7-220ENST00000541963 C1QTNF5Q9BXJ0 243 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 PINK1Q9BXM7 581 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 RTN4RQ9BZR6 473 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 ZNF350Q9GZX5 532 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 TPT1P8Q9HAU6 139 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 SLCO1B3Q9NPD5 702 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 STX18Q9P2W9 335 aaKnown RBP4.76□□□□□ -1.65
CPSF7-220ENST00000541963 CLCF1Q9UBD9 225 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 P2RX2Q9UBL9 471 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 FBXL17Q9UF56 701 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 ICAM5Q9UMF0 924 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 L3MBTL1Q9Y468 752 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 SPIN1Q9Y657 262 aaPredicted RBP4.76□□□□□ -1.65
CPSF7-220ENST00000541963 A0A096LPI6 279 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 NPIPA5A0A0B4J1W7 369 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 A0A0G2JPF8 293 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 TUBAL3A6NHL2 446 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 C17orf51A8MQB3 221 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 EVPLLA8MZ36 301 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 HNRNPCL2B2RXH8 293 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 HNRNPCL3B7ZW38 293 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 C5orf58C9J3I9 102 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 C9JVG2 144 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 NPIPA7E9PJI5 369 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 HMGN4O00479 90 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 ADAMDEC1O15204 470 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 SPRY3O43610 288 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 KIAA0513O60268 411 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 GOSR1O95249 250 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 OR2C1O95371 312 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 H6PDO95479 791 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 TGM6O95932 706 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 UBTFL6P0CB48 400 aaPredicted RBP4.75□□□□□ -1.65
CPSF7-220ENST00000541963 NPIPA8P0DM63 369 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 HNRNPCL4P0DMR1 293 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 NCF2P19878 526 aaPredicted RBP4.75□□□□□ -1.65
CPSF7-220ENST00000541963 HOXD3P31249 432 aaPredicted RBP4.75□□□□□ -1.65
CPSF7-220ENST00000541963 APOBEC1P41238 236 aaKnown RBP4.75□□□□□ -1.65
CPSF7-220ENST00000541963 CDKN2CP42773 168 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 HSPA13P48723 471 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 PCYT1AP49585 367 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 CLK1P49759 484 aaKnown RBP4.75□□□□□ -1.65
CPSF7-220ENST00000541963 NUDT6P53370 316 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 SUCLG1P53597 346 aaKnown RBP4.75□□□□□ -1.65
CPSF7-220ENST00000541963 CRISP3P54108 245 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 MFAP4P55083 255 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 CTBP2P56545 445 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 CLDN20P56880 219 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 DSTNP60981 165 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 ZNF117Q03924 483 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 FADDQ13158 208 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 SELENBP1Q13228 472 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 QPRTQ15274 297 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 CD226Q15762 336 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 C2orf68Q2NKX9 166 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 PCGF3Q3KNV8 242 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 TMEM176BQ3YBM2 270 aaPredicted RBP4.75□□□□□ -1.65
CPSF7-220ENST00000541963 MMEL1Q495T6 779 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 DNAL1Q4LDG9 190 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 LIN52Q52LA3 116 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 AGKQ53H12 422 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 SLC25A53Q5H9E4 307 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 HBMQ6B0K9 141 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 CBLN3Q6UW01 205 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 Q6ZSV7 163 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 ZNF550Q7Z398 422 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 ZNF554Q86TJ5 538 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 ZNF440Q8IYI8 595 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 SLC43A2Q8N370 569 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 POC5Q8NA72 575 aa4.75□□□□□ -1.65
CPSF7-220ENST00000541963 ACBD4Q8NC06 268 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms