RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 TMEM91Q6ZNR0 172 aa13.2□□□□□ -0.3
GCFC2-211ENST00000541687 ZNF680Q8NEM1 530 aa13.2□□□□□ -0.3
GCFC2-211ENST00000541687 FLRT3Q9NZU0 649 aa13.2□□□□□ -0.3
GCFC2-211ENST00000541687 RABL2AQ9UBK7 228 aaPredicted RBP13.2□□□□□ -0.3
GCFC2-211ENST00000541687 RABL2BQ9UNT1 228 aa13.2□□□□□ -0.3
GCFC2-211ENST00000541687 SEMA7AO75326 666 aa13.19□□□□□ -0.3
GCFC2-211ENST00000541687 NKX2-2O95096 273 aa13.19□□□□□ -0.3
GCFC2-211ENST00000541687 IFNGR1P15260 489 aa13.19□□□□□ -0.3
GCFC2-211ENST00000541687 POLR2HP52434 150 aaKnown RBP13.19□□□□□ -0.3
GCFC2-211ENST00000541687 GUCA2AQ02747 115 aa13.19□□□□□ -0.3
GCFC2-211ENST00000541687 SLC9A3R2Q15599 337 aa13.19□□□□□ -0.3
GCFC2-211ENST00000541687 TRAPPC6BQ86SZ2 158 aa13.19□□□□□ -0.3
GCFC2-211ENST00000541687 OR5H2Q8NGV7 314 aa13.19□□□□□ -0.3
GCFC2-211ENST00000541687 MED29Q9NX70 200 aa13.19□□□□□ -0.3
GCFC2-211ENST00000541687 DNAJB12Q9NXW2 375 aaKnown RBP13.19□□□□□ -0.3
GCFC2-211ENST00000541687 K7EQS6 105 aa13.19□□□□□ -0.3
GCFC2-211ENST00000541687 AKR7A3O95154 331 aa13.19□□□□□ -0.3
GCFC2-211ENST00000541687 NSA2O95478 260 aaKnown RBP13.19□□□□□ -0.3
GCFC2-211ENST00000541687 CBX7O95931 251 aa13.19□□□□□ -0.3
GCFC2-211ENST00000541687 LUMP51884 338 aaPredicted RBP13.19□□□□□ -0.3
GCFC2-211ENST00000541687 Q6ZTK2 550 aa13.19□□□□□ -0.3
GCFC2-211ENST00000541687 OR5D14Q8NGL3 314 aa13.19□□□□□ -0.3
GCFC2-211ENST00000541687 PTDSS2Q9BVG9 487 aa13.19□□□□□ -0.3
GCFC2-211ENST00000541687 BIN3Q9NQY0 253 aa13.19□□□□□ -0.3
GCFC2-211ENST00000541687 TAS2R4Q9NYW5 299 aa13.19□□□□□ -0.3
GCFC2-211ENST00000541687 A6NIZ1 184 aa13.19□□□□□ -0.3
GCFC2-211ENST00000541687 PLPP2O43688 288 aa13.19□□□□□ -0.3
GCFC2-211ENST00000541687 RAP1BP61224 184 aa13.19□□□□□ -0.3
GCFC2-211ENST00000541687 RAP1AP62834 184 aa13.19□□□□□ -0.3
GCFC2-211ENST00000541687 HOXB13Q92826 284 aaPredicted RBP13.19□□□□□ -0.3
GCFC2-211ENST00000541687 BORCS8Q96FH0 119 aa13.19□□□□□ -0.3
GCFC2-211ENST00000541687 EMC3Q9P0I2 261 aa13.19□□□□□ -0.3
GCFC2-211ENST00000541687 ACAD8Q9UKU7 415 aa13.19□□□□□ -0.3
GCFC2-211ENST00000541687 EXOGQ9Y2C4 368 aaKnown RBP13.19□□□□□ -0.3
GCFC2-211ENST00000541687 CNOT1A5YKK6 2376 aaKnown RBP13.19□□□□□ -0.3
GCFC2-211ENST00000541687 GPR171O14626 319 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 BPNT1O95861 308 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 FXYD4P59646 89 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 FGL1Q08830 312 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 PAPD4Q6PIY7 484 aaKnown RBP13.18□□□□□ -0.3
GCFC2-211ENST00000541687 CMIPQ8IY22 773 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 LRRC18Q8N456 261 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 CRISPLD2Q9H0B8 497 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 ZNF160Q9HCG1 818 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 SLCO1C1Q9NYB5 712 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 PLEK2Q9NYT0 353 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 SUSD2Q9UGT4 822 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 ATPIF1Q9UII2 106 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 CES1P1Q9UKY3 287 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 RTTNQ86VV8 2226 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 TMEM235A6NFC5 223 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 RAD51DO75771 328 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 IFNA2P01563 188 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 CAMLGP49069 296 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 WDR88Q6ZMY6 472 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 MAMSTRQ6ZN01 415 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 FAM57BQ71RH2 274 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 CRIPAKQ8N1N5 446 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 SCGB1C1Q8TD33 95 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 ASB17Q8WXJ9 295 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 A0A087WUJ7 227 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 HYAL1Q12794 435 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 OR2G2Q8NGZ5 317 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 C3orf49Q96BT1 292 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 NXF2Q9GZY0 626 aaKnown RBP13.18□□□□□ -0.3
GCFC2-211ENST00000541687 PCDHB16Q9NRJ7 776 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 POMT2Q9UKY4 750 aa13.18□□□□□ -0.3
GCFC2-211ENST00000541687 SPTY2D1-AS1A0A0U1RR47 76 aa13.17□□□□□ -0.3
GCFC2-211ENST00000541687 A8MVM7 634 aa13.17□□□□□ -0.3
GCFC2-211ENST00000541687 C1orf196B1AJZ1 125 aa13.17□□□□□ -0.3
GCFC2-211ENST00000541687 BHLHE40O14503 412 aa13.17□□□□□ -0.3
GCFC2-211ENST00000541687 NR2C1P13056 603 aa13.17□□□□□ -0.3
GCFC2-211ENST00000541687 ZNF85Q03923 595 aa13.17□□□□□ -0.3
GCFC2-211ENST00000541687 LINC00303Q3SY05 128 aa13.17□□□□□ -0.3
GCFC2-211ENST00000541687 CHRDL2Q6WN34 429 aa13.17□□□□□ -0.3
GCFC2-211ENST00000541687 C16orf47Q6ZP98 133 aaPredicted RBP13.17□□□□□ -0.3
GCFC2-211ENST00000541687 RHOUQ7L0Q8 258 aa13.17□□□□□ -0.3
GCFC2-211ENST00000541687 TCTE3Q8IZS6 198 aa13.17□□□□□ -0.3
GCFC2-211ENST00000541687 ZNF709Q8N972 641 aa13.17□□□□□ -0.3
GCFC2-211ENST00000541687 HAVCR2Q8TDQ0 301 aa13.17□□□□□ -0.3
GCFC2-211ENST00000541687 MOGAT1Q96PD6 335 aa13.17□□□□□ -0.3
GCFC2-211ENST00000541687 WDPCPO95876 746 aa13.17□□□□□ -0.3
GCFC2-211ENST00000541687 RAF1P04049 648 aa13.17□□□□□ -0.3
GCFC2-211ENST00000541687 CD3DP04234 171 aa13.17□□□□□ -0.3
GCFC2-211ENST00000541687 HOXB5P09067 269 aa13.17□□□□□ -0.3
GCFC2-211ENST00000541687 SERPINA2P20848 420 aa13.17□□□□□ -0.3
GCFC2-211ENST00000541687 GABRR1P24046 479 aa13.17□□□□□ -0.3
GCFC2-211ENST00000541687 CDKN2AP42771 156 aaKnown RBP13.17□□□□□ -0.3
GCFC2-211ENST00000541687 CAV2P51636 162 aa13.17□□□□□ -0.3
GCFC2-211ENST00000541687 PSG6Q00889 435 aa13.17□□□□□ -0.3
GCFC2-211ENST00000541687 EXOSC2Q13868 293 aaKnown RBP13.17□□□□□ -0.3
GCFC2-211ENST00000541687 C1orf53Q5VUE5 145 aa13.17□□□□□ -0.3
GCFC2-211ENST00000541687 OR6C1Q96RD1 312 aa13.17□□□□□ -0.3
GCFC2-211ENST00000541687 ZNF442Q9H7R0 627 aa13.17□□□□□ -0.3
GCFC2-211ENST00000541687 IMPA2O14732 288 aa13.17□□□□□ -0.3
GCFC2-211ENST00000541687 TSPAN15O95858 294 aa13.17□□□□□ -0.3
GCFC2-211ENST00000541687 OTX2P32243 289 aa13.17□□□□□ -0.3
GCFC2-211ENST00000541687 ZNF136P52737 540 aa13.17□□□□□ -0.3
GCFC2-211ENST00000541687 RPL27P61353 136 aaKnown RBP13.17□□□□□ -0.3
GCFC2-211ENST00000541687 DCAF7P61962 342 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms