RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 FAM208BQ5VWN6 2430 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 GOLGA6L7A0A1B0GV03 622 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 LINC00854A0A1B0GVQ3 168 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 A0A1B0GWB2 263 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 LRRIQ3A6PVS8 624 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-217ENST00000541578 GOLGA8TH3BQL2 631 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 M0QX08 132 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 CLOCKO15516 846 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 OR2J3O76001 311 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 IGHV3-13P01766 116 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 STSP08842 583 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 RBMY1CP0DJD4 496 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 OR8G3PP0DMU2 310 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 GZMAP12544 262 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 ATP6V1B2P21281 511 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 OTX1P32242 354 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-217ENST00000541578 SHMT2P34897 504 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 CSRP3P50461 194 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 DYNLL1P63167 89 aaKnown RBP3.28□□□□□ -1.88
SNHG1-217ENST00000541578 DEFB103AP81534 67 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 BCL2L1Q07817 233 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 RUNX3Q13761 415 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 ANGPT1Q15389 498 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 ZNF658Q5TYW1 1059 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-217ENST00000541578 C9orf135Q5VTT2 229 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 ZNF571Q7Z3V5 609 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-217ENST00000541578 MICU2Q8IYU8 434 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 SVOPLQ8N434 492 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 OR4F6Q8NGB9 312 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 OR9A1PQ8NGU1 263 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 OR56B4Q8NH76 319 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 PYROXD1Q8WU10 500 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 FGF11Q92914 225 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 FGGYQ96C11 551 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 TM4SF19Q96DZ7 209 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 CCDC126Q96EE4 140 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 C8orf76Q96K31 380 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 HSFY1Q96LI6 401 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 APOL2Q9BQE5 337 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 TSGA10Q9BZW7 698 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 AUNIPQ9H7T9 357 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 NIPAL2Q9H841 368 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 CCNB1IP1Q9NPC3 277 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 C20orf96Q9NUD7 363 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-217ENST00000541578 UBAP1Q9NZ09 502 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 KCNIP1Q9NZI2 227 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 PAK5Q9P286 719 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 SMAD5-AS1Q9Y6J3 95 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 CHD6Q8TD26 2715 aa3.28□□□□□ -1.88
SNHG1-217ENST00000541578 ANKRD11Q6UB99 2663 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-217ENST00000541578 MIA3Q5JRA6 1907 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 LOXHD1Q8IVV2 1947 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 ASTN1O14525 1302 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 TRBV11-1A0A0K0K1C0 115 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 A0A1B0GUA9 196 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 A0A1B0GVY2 172 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 TUBAL3A6NHL2 446 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 KRTAP9-6A8MVA2 160 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 E9PQ18 207 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 ZNF254O75437 659 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 STAMBPO95630 424 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 ERCC1P07992 297 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-217ENST00000541578 RPSAP08865 295 aaKnown RBP3.27□□□□□ -1.89
SNHG1-217ENST00000541578 HOXD4P09016 255 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-217ENST00000541578 CCDC166P0CW27 439 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 KITLGP21583 273 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 KPNA2P52292 529 aaKnown RBP3.27□□□□□ -1.89
SNHG1-217ENST00000541578 SLC25A1P53007 311 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 ARPC4P59998 168 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 DOC2AQ14183 400 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 MARCH8Q5T0T0 291 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 SLC22A10Q63ZE4 541 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 UFSP1Q6NVU6 142 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 GPRIN3Q6ZVF9 776 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 VRK2Q86Y07 508 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 C10orf67Q8IYJ2 551 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 SLC7A5P1Q8MH63 180 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 GABRG1Q8N1C3 465 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 LYG1Q8N1E2 194 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 Q8N377 158 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 GTPBP8Q8N3Z3 284 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-217ENST00000541578 TPRX1Q8N7U7 411 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 ZNF321PQ8N8H1 164 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 B3GNT7Q8NFL0 401 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 OR4K14Q8NGD5 310 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 OR52K1Q8NGK4 314 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 OR2A12Q8NGT7 310 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 OR2L2Q8NH16 312 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 FAM110BQ8TC76 370 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 PAQR8Q8TEZ7 354 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 SGK3Q96BR1 496 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 MBOAT4Q96T53 435 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 VGLL1Q99990 258 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 RBM4BQ9BQ04 359 aaKnown RBP3.27□□□□□ -1.89
SNHG1-217ENST00000541578 SOSTQ9BQB4 213 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 CNPY3Q9BT09 278 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 OSBPL10Q9BXB5 764 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 ACTR6Q9GZN1 396 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 FAM107BQ9H098 131 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 GBA3Q9H227 469 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms