RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 OR4F3Q6IEY1 312 aa2.51□□□□□ -2.01
RAP1B-224ENST00000541216 C12orf56Q8IXR9 622 aa2.51□□□□□ -2.01
RAP1B-224ENST00000541216 DTX3LQ8TDB6 740 aa2.51□□□□□ -2.01
RAP1B-224ENST00000541216 ASB9Q96DX5 294 aa2.51□□□□□ -2.01
RAP1B-224ENST00000541216 SLC38A2Q96QD8 506 aa2.51□□□□□ -2.01
RAP1B-224ENST00000541216 PARD6BQ9BYG5 372 aa2.51□□□□□ -2.01
RAP1B-224ENST00000541216 CDC42EP4Q9H3Q1 356 aaKnown RBP2.51□□□□□ -2.01
RAP1B-224ENST00000541216 NHEJ1Q9H9Q4 299 aaPredicted RBP2.51□□□□□ -2.01
RAP1B-224ENST00000541216 NTN4Q9HB63 628 aa2.51□□□□□ -2.01
RAP1B-224ENST00000541216 IL26Q9NPH9 171 aa2.51□□□□□ -2.01
RAP1B-224ENST00000541216 DEC1Q9P2X7 70 aa2.51□□□□□ -2.01
RAP1B-224ENST00000541216 EPS15L1Q9UBC2 864 aa2.51□□□□□ -2.01
RAP1B-224ENST00000541216 CACNA1SQ13698 1873 aa2.51□□□□□ -2.01
RAP1B-224ENST00000541216 EP300Q09472 2414 aaPredicted RBP2.51□□□□□ -2.01
RAP1B-224ENST00000541216 TENM4Q6N022 2769 aa2.5□□□□□ -2.01
RAP1B-224ENST00000541216 SPTAN1Q13813 2472 aaKnown RBP2.5□□□□□ -2.01
RAP1B-224ENST00000541216 RPAP1Q9BWH6 1393 aaPredicted RBP2.5□□□□□ -2.01
RAP1B-224ENST00000541216 DMXL1Q9Y485 3027 aa2.5□□□□□ -2.01
RAP1B-224ENST00000541216 ZZEF1O43149 2961 aa2.5□□□□□ -2.01
RAP1B-224ENST00000541216 C12orf71A8MTZ7 269 aa2.5□□□□□ -2.01
RAP1B-224ENST00000541216 SUPT3HO75486 399 aa2.5□□□□□ -2.01
RAP1B-224ENST00000541216 OXSR1O95747 527 aaPredicted RBP2.5□□□□□ -2.01
RAP1B-224ENST00000541216 RETP07949 1114 aa2.5□□□□□ -2.01
RAP1B-224ENST00000541216 IL9P15248 144 aa2.5□□□□□ -2.01
RAP1B-224ENST00000541216 DESP17661 470 aa2.5□□□□□ -2.01
RAP1B-224ENST00000541216 IL12AP29459 219 aa2.5□□□□□ -2.01
RAP1B-224ENST00000541216 NBL1P41271 181 aa2.5□□□□□ -2.01
RAP1B-224ENST00000541216 GRIA1P42261 906 aa2.5□□□□□ -2.01
RAP1B-224ENST00000541216 TFPI2P48307 235 aa2.5□□□□□ -2.01
RAP1B-224ENST00000541216 ACVR1Q04771 509 aa2.5□□□□□ -2.01
RAP1B-224ENST00000541216 NBPF5PQ86XG9 351 aaPredicted RBP2.5□□□□□ -2.01
RAP1B-224ENST00000541216 CCDC65Q8IXS2 484 aa2.5□□□□□ -2.01
RAP1B-224ENST00000541216 ZNF540Q8NDQ6 660 aa2.5□□□□□ -2.01
RAP1B-224ENST00000541216 MAIP1Q8WWC4 291 aa2.5□□□□□ -2.01
RAP1B-224ENST00000541216 CEP170P1Q96L14 293 aa2.5□□□□□ -2.01
RAP1B-224ENST00000541216 TTC25Q96NG3 672 aa2.5□□□□□ -2.01
RAP1B-224ENST00000541216 ZSCAN5AQ9BUG6 496 aa2.5□□□□□ -2.01
RAP1B-224ENST00000541216 GPR61Q9BZJ8 451 aa2.5□□□□□ -2.01
RAP1B-224ENST00000541216 DNTTIP1Q9H147 329 aa2.5□□□□□ -2.01
RAP1B-224ENST00000541216 RANBP3Q9H6Z4 567 aaPredicted RBP2.5□□□□□ -2.01
RAP1B-224ENST00000541216 LY9Q9HBG7 655 aa2.5□□□□□ -2.01
RAP1B-224ENST00000541216 LHX9Q9NQ69 397 aa2.5□□□□□ -2.01
RAP1B-224ENST00000541216 GIN1Q9NXP7 522 aa2.5□□□□□ -2.01
RAP1B-224ENST00000541216 ZNF226Q9NYT6 803 aa2.5□□□□□ -2.01
RAP1B-224ENST00000541216 XCL2Q9UBD3 114 aa2.5□□□□□ -2.01
RAP1B-224ENST00000541216 MRPS7Q9Y2R9 242 aaKnown RBP2.5□□□□□ -2.01
RAP1B-224ENST00000541216 ARFGEF2Q9Y6D5 1785 aa2.5□□□□□ -2.01
RAP1B-224ENST00000541216 SPTA1P02549 2419 aa2.5□□□□□ -2.01
RAP1B-224ENST00000541216 LRP4O75096 1905 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 UBR5O95071 2799 aaPredicted RBP2.49□□□□□ -2.01
RAP1B-224ENST00000541216 ITPR1Q14643 2758 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 IGLV3-22A0A075B6J6 115 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 CCL15-CCL14A0A0B4J2E2 113 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 IQANK1A0A1B0GTG1 560 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 A8MXQ7 604 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 PEX7O00628 323 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 SLC31A2O15432 143 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 PNMA6AP0CW24 399 aaPredicted RBP2.49□□□□□ -2.01
RAP1B-224ENST00000541216 ABOP16442 354 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 CXCL5P42830 114 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 PLD1Q13393 1074 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 CCL15Q16663 113 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 RFX4Q33E94 735 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 FILIP1LQ4L180 1135 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 OR52W1Q6IF63 320 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 TRIM69Q86WT6 500 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 H1FOOQ8IZA3 346 aaPredicted RBP2.49□□□□□ -2.01
RAP1B-224ENST00000541216 TEX9Q8N6V9 391 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 STEAP2Q8NFT2 490 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 IPMKQ8NFU5 416 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 VN1R2Q8NFZ6 395 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 MCOLN3Q8TDD5 553 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 CLMPQ9H6B4 373 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 ZFP14Q9HCL3 533 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 GLRX2Q9NS18 164 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 NECAP2Q9NVZ3 263 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 CALYQ9NYX4 217 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 KCNIP1Q9NZI2 227 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 PTBP2Q9UKA9 531 aaKnown RBP2.49□□□□□ -2.01
RAP1B-224ENST00000541216 CHD9Q3L8U1 2897 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 DNAH12Q6ZR08 3092 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 ITGB4P16144 1822 aa2.49□□□□□ -2.01
RAP1B-224ENST00000541216 KTN1Q86UP2 1357 aaKnown RBP2.49□□□□□ -2.01
RAP1B-224ENST00000541216 PIEZO2Q9H5I5 2752 aa2.48□□□□□ -2.01
RAP1B-224ENST00000541216 C2CD3Q4AC94 2353 aa2.48□□□□□ -2.01
RAP1B-224ENST00000541216 PPIAL4EA0A075B759 164 aa2.48□□□□□ -2.01
RAP1B-224ENST00000541216 TRAV26-1A0A087WT03 109 aa2.48□□□□□ -2.01
RAP1B-224ENST00000541216 TCP11X1B4DZS4 312 aa2.48□□□□□ -2.01
RAP1B-224ENST00000541216 POLR2DO15514 142 aaKnown RBP2.48□□□□□ -2.01
RAP1B-224ENST00000541216 MED7O43513 233 aa2.48□□□□□ -2.01
RAP1B-224ENST00000541216 B4GALT2O60909 372 aa2.48□□□□□ -2.01
RAP1B-224ENST00000541216 SNNO75324 88 aaPredicted RBP2.48□□□□□ -2.01
RAP1B-224ENST00000541216 CAPN1P07384 714 aa2.48□□□□□ -2.01
RAP1B-224ENST00000541216 HSMCR30P0CW71 290 aa2.48□□□□□ -2.01
RAP1B-224ENST00000541216 PPIAL4FP0DN26 164 aa2.48□□□□□ -2.01
RAP1B-224ENST00000541216 CCDC130P13994 396 aa2.48□□□□□ -2.01
RAP1B-224ENST00000541216 NCK1P16333 377 aa2.48□□□□□ -2.01
RAP1B-224ENST00000541216 CCR1P32246 355 aa2.48□□□□□ -2.01
RAP1B-224ENST00000541216 CCT3P49368 545 aaKnown RBP2.48□□□□□ -2.01
RAP1B-224ENST00000541216 MNAT1P51948 309 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms