RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 ANKRD30BLA7E2S9 258 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 A8MUA0 341 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 CENPBD1B2RD01 187 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 BET1O15155 118 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 DENRO43583 198 aaKnown RBP3.64□□□□□ -1.83
YBX3-210ENST00000540975 CALUO43852 315 aaPredicted RBP3.64□□□□□ -1.83
YBX3-210ENST00000540975 NPIPB7O75200 414 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 TOM1L1O75674 476 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 RPP14O95059 124 aaKnown RBP3.64□□□□□ -1.83
YBX3-210ENST00000540975 DHFRP00374 187 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 SERPINA3P01011 423 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 KRT8P05787 483 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 IGHV4-34P06331 123 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 CA3P07451 260 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 OR8G3PP0DMU2 310 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 ICAM2P13598 275 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 NT5EP21589 574 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 CMA1P23946 247 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 G0S2P27469 103 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 RORAP35398 523 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 ATP5C1P36542 298 aaKnown RBP3.64□□□□□ -1.83
YBX3-210ENST00000540975 SPAM1P38567 509 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 BDKRB1P46663 353 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 CEBPDP49716 269 aaPredicted RBP3.64□□□□□ -1.83
YBX3-210ENST00000540975 TMED10P49755 219 aaKnown RBP3.64□□□□□ -1.83
YBX3-210ENST00000540975 LINC00315P59091 139 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 GNGT1P63211 74 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 ZNF33AQ06730 810 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 SLC10A7Q0GE19 358 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 MERTKQ12866 999 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 SPP2Q13103 211 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 SLAQ13239 276 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 GPR176Q14439 515 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 PIGHQ14442 188 aaPredicted RBP3.64□□□□□ -1.83
YBX3-210ENST00000540975 HNRNPA1L2Q32P51 320 aaKnown RBP3.64□□□□□ -1.83
YBX3-210ENST00000540975 TIGITQ495A1 244 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 NADK2Q4G0N4 442 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 HIKESHIQ53FT3 197 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 BRMS1LQ5PSV4 323 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 ARMC12Q5T9G4 340 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 OR52E8Q6IFG1 317 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 C3orf33Q6P1S2 294 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 PP632Q6XCG6 107 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 PAGE2Q7Z2X7 111 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 ANKRD37Q7Z713 158 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 LHFPL4Q7Z7J7 247 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 SYVN1Q86TM6 617 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 TAC4Q86UU9 113 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 CBWD2Q8IUF1 395 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 LINC01561Q8N1V8 128 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 ZNF740Q8NDX6 193 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 OR8J1Q8NGP2 316 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 MITD1Q8WV92 249 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 TSEN15Q8WW01 171 aaKnown RBP3.64□□□□□ -1.83
YBX3-210ENST00000540975 CELF6Q96J87 481 aaKnown RBP3.64□□□□□ -1.83
YBX3-210ENST00000540975 MS4A14Q96JA4 679 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 DNAJC1Q96KC8 554 aaKnown RBP3.64□□□□□ -1.83
YBX3-210ENST00000540975 CCNL2Q96S94 520 aaPredicted RBP3.64□□□□□ -1.83
YBX3-210ENST00000540975 DERL2Q9GZP9 239 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 MFFQ9GZY8 342 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 NAT10Q9H0A0 1025 aaKnown RBP3.64□□□□□ -1.83
YBX3-210ENST00000540975 RAB17Q9H0T7 212 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 MAGT1Q9H0U3 335 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 VCX2Q9H322 139 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 DIABLOQ9NR28 239 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 ETNK2Q9NVF9 386 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 NKIRAS1Q9NYS0 192 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 ATP7BP35670 1465 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 PREX1Q8TCU6 1659 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 ASTN1O14525 1302 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 PCDH11XQ9BZA7 1347 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 ZFYVE16Q7Z3T8 1539 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 CASZ1Q86V15 1759 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 RIMS2Q9UQ26 1411 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 TRAPPC8Q9Y2L5 1435 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 TRBV6-6A0A0A6YYG2 114 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 FAM230AA0A1W2PPH8 454 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 EFCAB10A6NFE3 127 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 TRPC5OSA6NMA1 111 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 GABRR3A8MPY1 467 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 C2orf74A8MZ97 194 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 SUPT3HB4E1H0 165 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 H3BMQ9 156 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 PRRG1O14668 218 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 SCAMP2O15127 329 aaKnown RBP3.63□□□□□ -1.83
YBX3-210ENST00000540975 POLR1CO15160 346 aaPredicted RBP3.63□□□□□ -1.83
YBX3-210ENST00000540975 SNAI2O43623 268 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 PFKFB2O60825 505 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 UFL1O94874 794 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 AHSA1O95433 338 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 AGTP01019 485 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 IL1BP01584 269 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 GNAO1P09471 354 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 CD3GP09693 182 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 FUT1P19526 365 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 CCND2P30279 289 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 CRATP43155 626 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 CSNK1DP48730 415 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 ERFP50548 548 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 ATP5IP56385 69 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms