RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, human

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA4D-223	ENST00000540475	ALG10	Q5BKT4	473 aa		11.22	□□□□□ -0.61
SEMA4D-223	ENST00000540475	THEM4	Q5T1C6	240 aa		11.22	□□□□□ -0.61
SEMA4D-223	ENST00000540475	RGS7BP	Q6MZT1	257 aa	Predicted RBP	11.22	□□□□□ -0.61
SEMA4D-223	ENST00000540475	LINC01356	Q8N9X3	169 aa		11.22	□□□□□ -0.61
SEMA4D-223	ENST00000540475	RBM15B	Q8NDT2	890 aa	Known RBP	11.22	□□□□□ -0.61
SEMA4D-223	ENST00000540475	LZIC	Q8WZA0	190 aa		11.22	□□□□□ -0.61
SEMA4D-223	ENST00000540475	TPD52L3	Q96J77	140 aa		11.22	□□□□□ -0.61
SEMA4D-223	ENST00000540475	RNF121	Q9H920	327 aa		11.22	□□□□□ -0.61
SEMA4D-223	ENST00000540475	ARMCX1	Q9P291	453 aa		11.22	□□□□□ -0.61
SEMA4D-223	ENST00000540475	SNX13	Q9Y5W8	968 aa		11.22	□□□□□ -0.61
SEMA4D-223	ENST00000540475	TANC2	Q9HCD6	1990 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	IQCM	A0A1B0GVH7	501 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	RNF212B	A8MTL3	300 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	C17orf100	A8MU93	164 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	MCIDAS	D6RGH6	385 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	NME4	O00746	187 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	PIP5K1C	O60331	668 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	CCDC22	O60826	627 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	SLC2A10	O95528	541 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	CLPTM1	O96005	669 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	IGHV3-13	P01766	116 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	IFNW1	P05000	195 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	COX4I1	P13073	169 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	IFI30	P13284	250 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	CCL2	P13500	99 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	SRD5A1	P18405	259 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	MAK	P20794	623 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	APEX1	P27695	318 aa	Known RBP	11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	IFNA8	P32881	189 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	MDH1	P40925	334 aa	Known RBP	11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	SLC9A3	P48764	834 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	DVL1P1	P54792	670 aa	Predicted RBP	11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	RPL27	P61353	136 aa	Known RBP	11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	PLP2	Q04941	152 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	LIPE	Q05469	1076 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	MAD2L1BP	Q15013	274 aa	Predicted RBP	11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	TRAM2	Q15035	370 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	FAM205BP	Q63HN1	556 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	TMPRSS11F	Q6ZWK6	438 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	TSEN54	Q7Z6J9	526 aa	Known RBP	11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	VTCN1	Q7Z7D3	282 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	C1orf174	Q8IYL3	243 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	POU5F2	Q8N7G0	328 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	SYNPR	Q8TBG9	265 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	ACOT11	Q8WXI4	607 aa	Predicted RBP	11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	YIPF5	Q969M3	257 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	POM121L2	Q96KW2	1035 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	WAC	Q9BTA9	647 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	LRMDA	Q9H2I8	198 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	ANKRD19P	Q9H560	264 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	EFCAB1	Q9HAE3	211 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	CDH20	Q9HBT6	801 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	SLCO1C1	Q9NYB5	712 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	GMPR2	Q9P2T1	348 aa	Known RBP	11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	ABCD2	Q9UBJ2	740 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	DUSP13	Q9UII6	198 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	GPR160	Q9UJ42	338 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475	FZR1	Q9UM11	496 aa		11.21	□□□□□ -0.61
SEMA4D-223	ENST00000540475		A0A087WUU8	490 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475		J3KTA2	159 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	CXCR6	O00574	342 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	AHCYL1	O43865	530 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	NCR1	O76036	304 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	CST2	P09228	141 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	FAM157B	P0CG42	384 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	NAT2	P11245	290 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	ZNF32	P17041	273 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	STOM	P27105	288 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	CDA	P32320	146 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	KLF3	P57682	345 aa	Predicted RBP	11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	SELENOV	P59797	346 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	PSG4	Q00888	419 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	FMOD	Q06828	376 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	SF3A3	Q12874	501 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	MOG	Q16653	247 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	CR1L	Q2VPA4	569 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	PCGF3	Q3KNV8	242 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	PABPC1L2A	Q5JQF8	200 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	MBOAT2	Q6ZWT7	520 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	SYT9	Q86SS6	491 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	TREML1	Q86YW5	311 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	NRM	Q8IXM6	262 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	LRRC18	Q8N456	261 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	GEMIN6	Q8WXD5	167 aa	Known RBP	11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	C11orf40	Q8WZ69	217 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	RBP7	Q96R05	134 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	SNX18	Q96RF0	628 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	ZNF416	Q9BWM5	594 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	KCNN2	Q9H2S1	579 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	MED4	Q9NPJ6	270 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	TAAR3P	Q9P1P4	343 aa		11.2	□□□□□ -0.62
SEMA4D-223	ENST00000540475	LOC100509620	A0A075B734	347 aa		11.19	□□□□□ -0.62
SEMA4D-223	ENST00000540475		A6NIZ1	184 aa		11.19	□□□□□ -0.62
SEMA4D-223	ENST00000540475		B4DSR2	109 aa		11.19	□□□□□ -0.62
SEMA4D-223	ENST00000540475		H3BSA7	217 aa		11.19	□□□□□ -0.62
SEMA4D-223	ENST00000540475	NDUFAB1	O14561	156 aa		11.19	□□□□□ -0.62
SEMA4D-223	ENST00000540475	TCN1	P20061	433 aa	Predicted RBP	11.19	□□□□□ -0.62
SEMA4D-223	ENST00000540475	HNF1A	P20823	631 aa		11.19	□□□□□ -0.62
SEMA4D-223	ENST00000540475	APLNR	P35414	380 aa		11.19	□□□□□ -0.62
SEMA4D-223	ENST00000540475	WNT5A	P41221	380 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms