RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 ZNF500O60304 480 aaPredicted RBP10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 NR2C1P13056 603 aa10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 ACADSP16219 412 aa10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 EGR1P18146 543 aa10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 CD247P20963 164 aa10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 PCGF2P35227 344 aa10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 RBM34P42696 430 aaKnown RBP10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 DAP3P51398 398 aaKnown RBP10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 ZNF81P51508 661 aa10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 UGT2B15P54855 530 aa10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 MRPS34P82930 218 aaKnown RBP10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 HSF2Q03933 536 aa10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 SLC3A1Q07837 685 aa10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 ZNF718Q3SXZ3 478 aa10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 DCAF12L2Q5VW00 463 aa10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 RETREG3Q86VR2 466 aa10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 TSPYL5Q86VY4 417 aaPredicted RBP10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 RBM45Q8IUH3 476 aaKnown RBP10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 CPEB3Q8NE35 698 aaKnown RBP10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 VANGL1Q8TAA9 524 aaPredicted RBP10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 SLC26A7Q8TE54 656 aa10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 TSPEARQ8WU66 669 aa10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 ASB10Q8WXI3 467 aa10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 CGREF1Q99674 301 aa10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 PRSS27Q9BQR3 290 aa10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 KAT8Q9H7Z6 458 aaKnown RBP10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 SMURF2Q9HAU4 748 aa10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 CYSLTR2Q9NS75 346 aa10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 CGGBP1Q9UFW8 167 aaPredicted RBP10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 NDUFAF1Q9Y375 327 aa10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 PPIAL4EA0A075B759 164 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 PPIAL4CA0A0B4J2A2 164 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 GMNCA6NCL1 334 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 PPIAL4DF5H284 164 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 ANGPT2O15123 496 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 WIPF1O43516 503 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 TRMUO75648 421 aaKnown RBP10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 RGS9O75916 674 aaPredicted RBP10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 IGHV1-46P01743 117 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 MT-ND1P03886 318 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 ADH4P08319 380 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 TSPAN19P0C672 248 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 PPIAL4FP0DN26 164 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 FUT1P19526 365 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 STOMP27105 288 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 GCH1P30793 250 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 LIPAP38571 399 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 MMP15P51511 669 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 MTPNP58546 118 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 RPL18Q07020 188 aaKnown RBP10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 TSTQ16762 297 aaKnown RBP10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 PABPC1L2AQ5JQF8 200 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 AGBL2Q5U5Z8 902 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 MBNL2Q5VZF2 373 aaKnown RBP10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 CCDC80Q76M96 950 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 TREML1Q86YW5 311 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 LRRC18Q8N456 261 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 ICA1LQ8NDH6 482 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 LIPHQ8WWY8 451 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 TAMM41Q96BW9 452 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 POM121L2Q96KW2 1035 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 DIRC2Q96SL1 478 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 POLR2J2Q9GZM3 115 aaKnown RBP10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 EGLN1Q9GZT9 426 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 POLR2J3Q9H1A7 115 aaKnown RBP10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 NTN4Q9HB63 628 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 CCNB1IP1Q9NPC3 277 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 INIPQ9NRY2 104 aa10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 EIF3KQ9UBQ5 218 aaKnown RBP10.2□□□□□ -0.78
CBX3P4-202ENST00000540428 PLSCR5A0PG75 271 aa10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 H3BSA7 217 aa10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 ICMTO60725 284 aa10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 OR7A10O76100 309 aa10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 UBOX5O94941 541 aa10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 FSHBP01225 129 aa10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 F13BP05160 661 aa10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 ZNF32P17041 273 aa10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 FPR2P25090 351 aa10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 GLO1Q04760 184 aa10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 SELPLGQ14242 412 aa10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 VMACQ2NL98 169 aa10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 BEND6Q5SZJ8 279 aaPredicted RBP10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 ARMC4Q5T2S8 1044 aa10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 ZNF101Q8IZC7 436 aa10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 BPIFB2Q8N4F0 458 aa10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 SYT14Q8NB59 555 aa10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 CCL17Q92583 94 aa10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 GTF3AQ92664 365 aaKnown RBP10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 NABP1Q96AH0 204 aa10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 NMD3Q96D46 503 aaKnown RBP10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 SGTBQ96EQ0 304 aa10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 MARS2Q96GW9 593 aaKnown RBP10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 SLC6A7Q99884 636 aa10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 GAL3ST1Q99999 423 aa10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 C7orf69Q9H7B7 122 aa10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 NANOGQ9H9S0 305 aa10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 OPN4Q9UHM6 478 aa10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 ZDHHC8Q9ULC8 765 aa10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 UGT2A1Q9Y4X1 527 aa10.19□□□□□ -0.78
CBX3P4-202ENST00000540428 CACNG2Q9Y698 323 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms