RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 MPP4Q96JB8 637 aa10.6□□□□□ -0.71
COPS7A-211ENST00000540408 ZNF347Q96SE7 839 aa10.6□□□□□ -0.71
COPS7A-211ENST00000540408 DIRC2Q96SL1 478 aa10.6□□□□□ -0.71
COPS7A-211ENST00000540408 WFDC6Q9BQY6 131 aa10.6□□□□□ -0.71
COPS7A-211ENST00000540408 PARD6BQ9BYG5 372 aa10.6□□□□□ -0.71
COPS7A-211ENST00000540408 SIAEQ9HAT2 523 aa10.6□□□□□ -0.71
COPS7A-211ENST00000540408 STX18Q9P2W9 335 aaKnown RBP10.6□□□□□ -0.71
COPS7A-211ENST00000540408 CGGBP1Q9UFW8 167 aaPredicted RBP10.6□□□□□ -0.71
COPS7A-211ENST00000540408 ZDHHC8Q9ULC8 765 aa10.6□□□□□ -0.71
COPS7A-211ENST00000540408 TRIM33Q9UPN9 1127 aa10.6□□□□□ -0.71
COPS7A-211ENST00000540408 CACNG2Q9Y698 323 aa10.6□□□□□ -0.71
COPS7A-211ENST00000540408 USH1CQ9Y6N9 552 aa10.6□□□□□ -0.71
COPS7A-211ENST00000540408 C5orf49A4QMS7 147 aa10.59□□□□□ -0.71
COPS7A-211ENST00000540408 TRAPPC13A5PLN9 417 aa10.59□□□□□ -0.71
COPS7A-211ENST00000540408 M0QX08 132 aa10.59□□□□□ -0.71
COPS7A-211ENST00000540408 M0R3H8 397 aa10.59□□□□□ -0.71
COPS7A-211ENST00000540408 KPNA4O00629 521 aaPredicted RBP10.59□□□□□ -0.71
COPS7A-211ENST00000540408 ZNF500O60304 480 aaPredicted RBP10.59□□□□□ -0.71
COPS7A-211ENST00000540408 TGDSO95455 350 aa10.59□□□□□ -0.71
COPS7A-211ENST00000540408 IGHV1-46P01743 117 aa10.59□□□□□ -0.71
COPS7A-211ENST00000540408 ASAH2BP0C7U1 165 aa10.59□□□□□ -0.71
COPS7A-211ENST00000540408 NR2C1P13056 603 aa10.59□□□□□ -0.71
COPS7A-211ENST00000540408 MAKP20794 623 aa10.59□□□□□ -0.71
COPS7A-211ENST00000540408 PRTN3P24158 256 aa10.59□□□□□ -0.71
COPS7A-211ENST00000540408 GUCA1AP43080 201 aaPredicted RBP10.59□□□□□ -0.71
COPS7A-211ENST00000540408 GDI2P50395 445 aaKnown RBP10.59□□□□□ -0.71
COPS7A-211ENST00000540408 DAP3P51398 398 aaKnown RBP10.59□□□□□ -0.71
COPS7A-211ENST00000540408 HIST3H3Q16695 136 aa10.59□□□□□ -0.71
COPS7A-211ENST00000540408 DUSP7Q16829 419 aa10.59□□□□□ -0.71
COPS7A-211ENST00000540408 CYP51A1Q16850 503 aa10.59□□□□□ -0.71
COPS7A-211ENST00000540408 PABPC1L2AQ5JQF8 200 aa10.59□□□□□ -0.71
COPS7A-211ENST00000540408 PAGE3Q5JUK9 113 aa10.59□□□□□ -0.71
COPS7A-211ENST00000540408 ZNF771Q7L3S4 317 aaPredicted RBP10.59□□□□□ -0.71
COPS7A-211ENST00000540408 FUNDC1Q8IVP5 155 aa10.59□□□□□ -0.71
COPS7A-211ENST00000540408 ALDH16A1Q8IZ83 802 aa10.59□□□□□ -0.71
COPS7A-211ENST00000540408 KLHL36Q8N4N3 616 aa10.59□□□□□ -0.71
COPS7A-211ENST00000540408 LRRC17Q8N6Y2 441 aa10.59□□□□□ -0.71
COPS7A-211ENST00000540408 SYT14Q8NB59 555 aa10.59□□□□□ -0.71
COPS7A-211ENST00000540408 NOXO1Q8NFA2 376 aa10.59□□□□□ -0.71
COPS7A-211ENST00000540408 OR6T1Q8NGN1 323 aa10.59□□□□□ -0.71
COPS7A-211ENST00000540408 GTF3AQ92664 365 aaKnown RBP10.59□□□□□ -0.71
COPS7A-211ENST00000540408 ARHGDIGQ99819 225 aa10.59□□□□□ -0.71
COPS7A-211ENST00000540408 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.59□□□□□ -0.71
COPS7A-211ENST00000540408 OPN4Q9UHM6 478 aa10.59□□□□□ -0.71
COPS7A-211ENST00000540408 NUP50Q9UKX7 468 aa10.59□□□□□ -0.71
COPS7A-211ENST00000540408 SLC7A7Q9UM01 511 aa10.59□□□□□ -0.71
COPS7A-211ENST00000540408 AUP1Q9Y679 476 aa10.59□□□□□ -0.71
COPS7A-211ENST00000540408 V9GYY5 206 aaPredicted RBP10.59□□□□□ -0.71
COPS7A-211ENST00000540408 GMNCA6NCL1 334 aa10.58□□□□□ -0.72
COPS7A-211ENST00000540408 UBOX5O94941 541 aa10.58□□□□□ -0.72
COPS7A-211ENST00000540408 FSHBP01225 129 aa10.58□□□□□ -0.72
COPS7A-211ENST00000540408 MMP7P09237 267 aaPredicted RBP10.58□□□□□ -0.72
COPS7A-211ENST00000540408 SBK2P0C263 348 aa10.58□□□□□ -0.72
COPS7A-211ENST00000540408 ACADSP16219 412 aa10.58□□□□□ -0.72
COPS7A-211ENST00000540408 CD247P20963 164 aa10.58□□□□□ -0.72
COPS7A-211ENST00000540408 MMP15P51511 669 aa10.58□□□□□ -0.72
COPS7A-211ENST00000540408 ARHGDIAP52565 204 aa10.58□□□□□ -0.72
COPS7A-211ENST00000540408 MRPS34P82930 218 aaKnown RBP10.58□□□□□ -0.72
COPS7A-211ENST00000540408 BAMBIQ13145 260 aa10.58□□□□□ -0.72
COPS7A-211ENST00000540408 NPTX1Q15818 432 aa10.58□□□□□ -0.72
COPS7A-211ENST00000540408 SGCAQ16586 387 aa10.58□□□□□ -0.72
COPS7A-211ENST00000540408 SPATA46Q5T0L3 261 aa10.58□□□□□ -0.72
COPS7A-211ENST00000540408 MBNL2Q5VZF2 373 aaKnown RBP10.58□□□□□ -0.72
COPS7A-211ENST00000540408 ARL9Q6T311 187 aa10.58□□□□□ -0.72
COPS7A-211ENST00000540408 DOK3Q7L591 496 aa10.58□□□□□ -0.72
COPS7A-211ENST00000540408 ZER1Q7Z7L7 766 aa10.58□□□□□ -0.72
COPS7A-211ENST00000540408 SLC30A8Q8IWU4 369 aa10.58□□□□□ -0.72
COPS7A-211ENST00000540408 SPICQ8N5J4 248 aa10.58□□□□□ -0.72
COPS7A-211ENST00000540408 SIGLECL1Q8N7X8 197 aa10.58□□□□□ -0.72
COPS7A-211ENST00000540408 VANGL1Q8TAA9 524 aaPredicted RBP10.58□□□□□ -0.72
COPS7A-211ENST00000540408 SLC25A40Q8TBP6 338 aa10.58□□□□□ -0.72
COPS7A-211ENST00000540408 KLF14Q8TD94 323 aaPredicted RBP10.58□□□□□ -0.72
COPS7A-211ENST00000540408 RASSF5Q8WWW0 418 aa10.58□□□□□ -0.72
COPS7A-211ENST00000540408 DVL3Q92997 716 aaPredicted RBP10.58□□□□□ -0.72
COPS7A-211ENST00000540408 SLC25A28Q96A46 364 aa10.58□□□□□ -0.72
COPS7A-211ENST00000540408 MARS2Q96GW9 593 aaKnown RBP10.58□□□□□ -0.72
COPS7A-211ENST00000540408 MRI1Q9BV20 369 aa10.58□□□□□ -0.72
COPS7A-211ENST00000540408 MRPL13Q9BYD1 178 aaKnown RBP10.58□□□□□ -0.72
COPS7A-211ENST00000540408 ELOVL3Q9HB03 270 aa10.58□□□□□ -0.72
COPS7A-211ENST00000540408 PLEK2Q9NYT0 353 aa10.58□□□□□ -0.72
COPS7A-211ENST00000540408 NPTNQ9Y639 398 aa10.58□□□□□ -0.72
COPS7A-211ENST00000540408 TRBV5-3A0A0A0MS03 114 aa10.57□□□□□ -0.72
COPS7A-211ENST00000540408 POM121CA8CG34 1229 aa10.57□□□□□ -0.72
COPS7A-211ENST00000540408 H3BSA7 217 aa10.57□□□□□ -0.72
COPS7A-211ENST00000540408 TRMUO75648 421 aaKnown RBP10.57□□□□□ -0.72
COPS7A-211ENST00000540408 OPN1SWP03999 348 aa10.57□□□□□ -0.72
COPS7A-211ENST00000540408 F13BP05160 661 aa10.57□□□□□ -0.72
COPS7A-211ENST00000540408 ADH4P08319 380 aa10.57□□□□□ -0.72
COPS7A-211ENST00000540408 ZNF32P17041 273 aa10.57□□□□□ -0.72
COPS7A-211ENST00000540408 FUT1P19526 365 aa10.57□□□□□ -0.72
COPS7A-211ENST00000540408 TNFSF4P23510 183 aa10.57□□□□□ -0.72
COPS7A-211ENST00000540408 MAGOHP61326 146 aaKnown RBP10.57□□□□□ -0.72
COPS7A-211ENST00000540408 IL13RA1P78552 427 aa10.57□□□□□ -0.72
COPS7A-211ENST00000540408 TNFAIP6P98066 277 aaPredicted RBP10.57□□□□□ -0.72
COPS7A-211ENST00000540408 AGKQ53H12 422 aa10.57□□□□□ -0.72
COPS7A-211ENST00000540408 C10orf128Q5T292 105 aa10.57□□□□□ -0.72
COPS7A-211ENST00000540408 TREML4Q6UXN2 200 aa10.57□□□□□ -0.72
COPS7A-211ENST00000540408 PATL1Q86TB9 770 aaKnown RBP10.57□□□□□ -0.72
COPS7A-211ENST00000540408 ZNF101Q8IZC7 436 aa10.57□□□□□ -0.72
COPS7A-211ENST00000540408 ABHD4Q8TB40 342 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms