RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 CEACAM16Q2WEN9 425 aa16.66■□□□□ 0.26
TNFRSF1A-213ENST00000540022 ZNF786Q8N393 782 aa16.66■□□□□ 0.26
TNFRSF1A-213ENST00000540022 ZNF610Q8N9Z0 462 aa16.66■□□□□ 0.26
TNFRSF1A-213ENST00000540022 ZNF511Q8NB15 262 aa16.66■□□□□ 0.26
TNFRSF1A-213ENST00000540022 OR6K6Q8NGW6 343 aa16.66■□□□□ 0.26
TNFRSF1A-213ENST00000540022 SSC4DQ8WTU2 575 aa16.66■□□□□ 0.26
TNFRSF1A-213ENST00000540022 ZMYND19Q96E35 227 aaPredicted RBP16.66■□□□□ 0.26
TNFRSF1A-213ENST00000540022 RHNO1Q9BSD3 238 aa16.66■□□□□ 0.26
TNFRSF1A-213ENST00000540022 RBM24Q9BX46 236 aaKnown RBP16.66■□□□□ 0.26
TNFRSF1A-213ENST00000540022 OPN3Q9H1Y3 402 aaPredicted RBP16.66■□□□□ 0.26
TNFRSF1A-213ENST00000540022 MOKQ9UQ07 419 aa16.66■□□□□ 0.26
TNFRSF1A-213ENST00000540022 UGT2A1Q9Y4X1 527 aa16.66■□□□□ 0.26
TNFRSF1A-213ENST00000540022 SLC22A31A6NKX4 558 aa16.65■□□□□ 0.26
TNFRSF1A-213ENST00000540022 RPL36A-HNRNPH2H7BZ11 118 aa16.65■□□□□ 0.26
TNFRSF1A-213ENST00000540022 SLC1A7O00341 560 aa16.65■□□□□ 0.26
TNFRSF1A-213ENST00000540022 IL18BPO95998 194 aa16.65■□□□□ 0.26
TNFRSF1A-213ENST00000540022 CD8BP10966 210 aa16.65■□□□□ 0.26
TNFRSF1A-213ENST00000540022 DBTP11182 482 aaKnown RBP16.65■□□□□ 0.26
TNFRSF1A-213ENST00000540022 BMP5P22003 454 aa16.65■□□□□ 0.26
TNFRSF1A-213ENST00000540022 GSTT1P30711 240 aa16.65■□□□□ 0.26
TNFRSF1A-213ENST00000540022 OPRM1P35372 400 aa16.65■□□□□ 0.26
TNFRSF1A-213ENST00000540022 CXCR4P61073 352 aa16.65■□□□□ 0.26
TNFRSF1A-213ENST00000540022 OTPQ5XKR4 325 aa16.65■□□□□ 0.26
TNFRSF1A-213ENST00000540022 UGT2A3Q6UWM9 527 aa16.65■□□□□ 0.26
TNFRSF1A-213ENST00000540022 LIX1LQ8IVB5 337 aa16.65■□□□□ 0.26
TNFRSF1A-213ENST00000540022 PLCXD1Q9NUJ7 323 aa16.65■□□□□ 0.26
TNFRSF1A-213ENST00000540022 ZNF629Q9UEG4 869 aaPredicted RBP16.65■□□□□ 0.26
TNFRSF1A-213ENST00000540022 WARS2Q9UGM6 360 aaKnown RBP16.65■□□□□ 0.26
TNFRSF1A-213ENST00000540022 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.65■□□□□ 0.26
TNFRSF1A-213ENST00000540022 TVP23AA6NH52 213 aa16.65■□□□□ 0.26
TNFRSF1A-213ENST00000540022 ZNF587BE7ETH6 402 aa16.65■□□□□ 0.26
TNFRSF1A-213ENST00000540022 MPZL1O95297 269 aa16.65■□□□□ 0.26
TNFRSF1A-213ENST00000540022 CDAP32320 146 aa16.65■□□□□ 0.26
TNFRSF1A-213ENST00000540022 MTNR1AP48039 350 aa16.65■□□□□ 0.26
TNFRSF1A-213ENST00000540022 GLO1Q04760 184 aa16.65■□□□□ 0.26
TNFRSF1A-213ENST00000540022 C9orf135Q5VTT2 229 aa16.65■□□□□ 0.26
TNFRSF1A-213ENST00000540022 GLB1L2Q8IW92 636 aa16.65■□□□□ 0.26
TNFRSF1A-213ENST00000540022 HTRA1Q92743 480 aa16.65■□□□□ 0.26
TNFRSF1A-213ENST00000540022 HAO2Q9NYQ3 351 aa16.65■□□□□ 0.26
TNFRSF1A-213ENST00000540022 RPL36Q9Y3U8 105 aaKnown RBP16.65■□□□□ 0.26
TNFRSF1A-213ENST00000540022 MED12LQ86YW9 2145 aa16.64■□□□□ 0.26
TNFRSF1A-213ENST00000540022 A0A1W2PPL8 197 aa16.64■□□□□ 0.25
TNFRSF1A-213ENST00000540022 SNTNA6NMZ2 147 aa16.64■□□□□ 0.25
TNFRSF1A-213ENST00000540022 FAM20BO75063 409 aa16.64■□□□□ 0.25
TNFRSF1A-213ENST00000540022 APOL3O95236 402 aa16.64■□□□□ 0.25
TNFRSF1A-213ENST00000540022 TFP02787 698 aa16.64■□□□□ 0.25
TNFRSF1A-213ENST00000540022 SCG5P05408 212 aa16.64■□□□□ 0.25
TNFRSF1A-213ENST00000540022 GAAP10253 952 aa16.64■□□□□ 0.25
TNFRSF1A-213ENST00000540022 LAP3P28838 519 aa16.64■□□□□ 0.25
TNFRSF1A-213ENST00000540022 SLC15A1P46059 708 aa16.64■□□□□ 0.25
TNFRSF1A-213ENST00000540022 ZNF84P51523 738 aa16.64■□□□□ 0.25
TNFRSF1A-213ENST00000540022 ADORA2A-AS1P86434 159 aa16.64■□□□□ 0.25
TNFRSF1A-213ENST00000540022 TMED1Q13445 227 aa16.64■□□□□ 0.25
TNFRSF1A-213ENST00000540022 C4orf17Q53FE4 359 aa16.64■□□□□ 0.25
TNFRSF1A-213ENST00000540022 LCN1P1Q5VSP4 162 aa16.64■□□□□ 0.25
TNFRSF1A-213ENST00000540022 Q6ZT83 130 aa16.64■□□□□ 0.25
TNFRSF1A-213ENST00000540022 FOXL2NBQ6ZUU3 175 aa16.64■□□□□ 0.25
TNFRSF1A-213ENST00000540022 SLC26A10Q8NG04 563 aa16.64■□□□□ 0.25
TNFRSF1A-213ENST00000540022 RNFT2Q96EX2 444 aa16.64■□□□□ 0.25
TNFRSF1A-213ENST00000540022 SEC61A2Q9H9S3 476 aa16.64■□□□□ 0.25
TNFRSF1A-213ENST00000540022 MRPL22Q9NWU5 206 aaKnown RBP16.64■□□□□ 0.25
TNFRSF1A-213ENST00000540022 DOCK7Q96N67 2140 aa16.63■□□□□ 0.25
TNFRSF1A-213ENST00000540022 A0A1B0GUH1 482 aa16.63■□□□□ 0.25
TNFRSF1A-213ENST00000540022 WIPF3A6NGB9 483 aa16.63■□□□□ 0.25
TNFRSF1A-213ENST00000540022 SEC14L2O76054 403 aa16.63■□□□□ 0.25
TNFRSF1A-213ENST00000540022 CNOT4O95628 575 aaKnown RBP16.63■□□□□ 0.25
TNFRSF1A-213ENST00000540022 HLA-DQA2P01906 255 aa16.63■□□□□ 0.25
TNFRSF1A-213ENST00000540022 ITGA5P08648 1049 aa16.63■□□□□ 0.25
TNFRSF1A-213ENST00000540022 CCDC159P0C7I6 412 aa16.63■□□□□ 0.25
TNFRSF1A-213ENST00000540022 CRHBPP24387 322 aa16.63■□□□□ 0.25
TNFRSF1A-213ENST00000540022 HSF2Q03933 536 aa16.63■□□□□ 0.25
TNFRSF1A-213ENST00000540022 GGTLC2Q14390 218 aa16.63■□□□□ 0.25
TNFRSF1A-213ENST00000540022 MEP1BQ16820 701 aa16.63■□□□□ 0.25
TNFRSF1A-213ENST00000540022 ABHD12BQ7Z5M8 362 aaPredicted RBP16.63■□□□□ 0.25
TNFRSF1A-213ENST00000540022 RELL2Q8NC24 303 aaPredicted RBP16.63■□□□□ 0.25
TNFRSF1A-213ENST00000540022 OR51G2Q8NGK0 314 aa16.63■□□□□ 0.25
TNFRSF1A-213ENST00000540022 GGHQ92820 318 aa16.63■□□□□ 0.25
TNFRSF1A-213ENST00000540022 LGALS12Q96DT0 336 aa16.63■□□□□ 0.25
TNFRSF1A-213ENST00000540022 CCDC120Q96HB5 630 aa16.63■□□□□ 0.25
TNFRSF1A-213ENST00000540022 FOXB1Q99853 325 aa16.63■□□□□ 0.25
TNFRSF1A-213ENST00000540022 PSORS1C1Q9UIG5 152 aa16.63■□□□□ 0.25
TNFRSF1A-213ENST00000540022 SLC5A6Q9Y289 635 aa16.63■□□□□ 0.25
TNFRSF1A-213ENST00000540022 ZNF99A8MXY4 864 aaPredicted RBP16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 DVL2O14641 736 aa16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 MSTNO14793 375 aa16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 SELENOFO60613 162 aa16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 MRPL3P09001 348 aaKnown RBP16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 IGHV1-2P23083 117 aa16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 MPGP29372 298 aa16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 BLVRAP53004 296 aa16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 CSNK2BP67870 215 aa16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 ARF1P84077 181 aaKnown RBP16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 STK11Q15831 433 aa16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 RBM48Q5RL73 367 aaKnown RBP16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 ZNF474Q6S9Z5 364 aaPredicted RBP16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 SHFQ7M4L6 423 aa16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 LUZP2Q86TE4 346 aa16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 TIGD4Q8IY51 512 aa16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 GABRG1Q8N1C3 465 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms